VDBG_08703 (Verticillium albo atrum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 VDBG_08703 T31482_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
VDBG_08703T0 RRM 217 269
VDBG_08703T0 RRM 308 365
VDBG_08703T0 RRM 405 464
VDBG_08703T0 RRM 490 553

Links

Other RRM family RBPs
Other Verticillium albo atrum RBPs

49 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PMAA_071470 Penicillium marneffei PMAA_071470 N 0.881
estExt_fgenesh1_pg.C_sca_10_chr8_2_00298 Nectria haematococca estExt_fgenesh1_pg.C_sca_10_chr8_2_00298 N 0.893
estExt_fgenesh1_pg.C_260060 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_260060 N 0.888
e_gw1.17.287.1 Trichoderma reesei e_gw1.17.287.1 N 0.905
e_gw1.15.72.1 Trichoderma atroviride e_gw1.15.72.1 N 0.888
e_gw1.10.53.1 Trichoderma virens e_gw1.10.53.1 N 0.909
NCU06459 Neurospora crassa NCU06459 N 0.925
NFIA_082390 Neosartorya fischeri CADNFIAG00007689 N 0.860
ATEG_06757 Aspergillus terreus CADATEAG00009116 N 0.848
AO090001000681 Aspergillus oryzae CADAORAG00000620 N 0.844
ANIA_07480 Aspergillus nidulans CADANIAG00000573 N 0.840
estExt_fgenesh1_pm.C_60118 Neurospora tetrasperma estExt_fgenesh1_pm.C_60118 N 0.929
estExt_fgenesh3_kg.C_190032 Neurospora discreta estExt_fgenesh3_kg.C_190032 N 0.921
Pc22g08880 Penicillium chrysogenum Pc22g08880 N 0.851
Pa_7_9880 Podospora anserina Pa_7_9880 N 0.905
GSTUMT00008077001 Tuber melanosporum GSTUMT00008077001 N 0.885
fgenesh1_pm.00082_#_76 Aspergillus carbonarius fgenesh1_pm.00082_#_76 N 0.852
estExt_fgenesh1_pm.C_10719 Cryphonectria parasitica estExt_fgenesh1_pm.C_10719 N 0.905
EAT78895.1 Phaeosphaeria nodorum EAT78895.1 N 0.872
fgenesh1_pg.4_#_772 Myceliophthora thermophila fgenesh1_pg.4_#_772 N 0.934
estExt_Genewise1Plus.C_chr_30420 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_30420 N 0.852
estExt_Genewise1.C_32212 Thielavia terrestris estExt_Genewise1.C_32212 N 0.909
estExt_Genewise1.C_240173 Cochliobolus heterostrophus C5 estExt_Genewise1.C_240173 N 0.872
An02g14100 Aspergillus niger CADANGAG00002937 N 0.852
AFUA_2G05670 Aspergillus fumigatus CADAFUAG00003365 N 0.864
AFLA_129820 Aspergillus flavus CADAFLAG00010040 N 0.848
MCYG_03534 Microsporum canis MCYG_03534 N 0.860
GLRG_03643 Colletotrichum graminicola GLRG_03643 N 0.921
FVEG_07083 Fusarium verticillioides FVEG_07083 N 0.888
FOXG_09455 Fusarium oxysporum FOXG_09455 N 0.888
FGSG_05444 Fusarium graminearum FGSG_05444 N 0.892
CPSG_07981 Coccidioides posadasii CPSG_07981 N 0.861
CIMG_00769 Coccidioides immitis CIMG_00769 N 0.868
CHGG_05709 Chaetomium globosum CHGG_05709 N 0.929
BDBG_09466 Blastomyces dermatitidis BDBG_09466 N 0.885
BC1G_14118 Botrytis cinerea BC1G_14118 N 0.884
MGG_08898 Magnaporthe oryzae MGG_08898 N 0.905
MGYG_03143 Microsporum gypseum MGYG_03143 N 0.848
ACLA_068670 Aspergillus clavatus CADACLAG00006690 N 0.852
VDAG_06364 Verticillium dahliae VDAG_06364 N 0.971
UREG_00743 Uncinocarpus reesii UREG_00743 N 0.856
TESG_05970 Trichophyton tonsurans TESG_05970 N 0.848
TERG_04964 Trichophyton rubrum TERG_04964 N 0.848
TEQG_01254 Trichophyton equinum TEQG_01254 N 0.848
SS1G_13716 Sclerotinia sclerotiorum SS1G_13716 N 0.880
SNOG_13871 Stagonospora nodorum SNOG_13871 N 0.872
PTRG_09392 Pyrenophora tritici repentis PTRG_09392 N 0.872
PABG_04754 Paracoccidioides brasiliensis PABG_04754 N 0.881
ARB_03865 Arthroderma benhamiae ARB_03865 N 0.848