CPIJ000383 (Culex quinquefasciatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CPIJ000383 T34194_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Cnot4
M008_0.6 		Drosophila melanogaster ASACAHW RNAcompete
Ray et al.(2013)
RNCMPT00008 		0.935
CNOT4
M147_0.6 		Homo sapiens GACAGA RNAcompete
Ray et al.(2013)
RNCMPT00156 		0.753
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
CPIJ000383-PA RRM 113 189

Links

Other RRM family RBPs
Other Culex quinquefasciatus RBPs

62 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
FGSG_10829 Fusarium graminearum FGSG_10829 N 0.000
Cd36_81440 Candida dubliniensis Cd36_81440 N 0.000
estExt_fgenesh2_pm.C_110045 Heterobasidion annosum estExt_fgenesh2_pm.C_110045 N 0.000
estExt_Genewise1.C_31474 Agaricus bisporus estExt_Genewise1.C_31474 N 0.000
fgenesh2_kg.7_#_69_#_840_2_CFPN Serpula lacrymans fgenesh2_kg.7_#_69_#_840_2_CFPN N 0.000
GSTUMT00005826001 Tuber melanosporum GSTUMT00005826001 N 0.000
Smp_099900 Schistosoma mansoni Smp_099900 N 0.000
XP_001191490.1 Strongylocentrotus purpuratus XP_001191490.1 N 0.000
XP_002493623.1 Pichia pastoris XP_002493623.1 N 0.000
mgf000781m Mimulus guttatus mgf000781m N 0.000
e_gwh1.21.47.1 Laccaria bicolor e_gwh1.21.47.1 N 0.000
FOXG_12762 Fusarium oxysporum FOXG_12762 N 0.000
FVEG_11503 Fusarium verticillioides FVEG_11503 N 0.000
GLRG_05139 Colletotrichum graminicola GLRG_05139 N 0.000
PTRG_00525 Pyrenophora tritici repentis PTRG_00525 N 0.000
RO3G_08915 Rhizopus oryzae RO3G_08915 N 0.000
SNOG_06906 Stagonospora nodorum SNOG_06906 N 0.000
AFLA_095620 Aspergillus flavus CADAFLAG00009247 N 0.000
AO090113000083 Aspergillus oryzae CADAORAG00011692 N 0.000
XP_785608.2 Strongylocentrotus purpuratus XP_785608.2 N 0.000