CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBMX2
(
Canis familiaris
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSCAFG00000018770
T35186_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCAFP00000027683
RRM
38
111
IFLGGLPYELTEGDIICVFSQINRYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIR
Links
Other
RRM
family RBPs
Other
Canis familiaris
RBPs
93 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
XR_023755.1
Pan troglodytes
ENSPTRG00000022269
N
0.905
GG21207
Drosophila erecta
FBgn0113387
N
0.770
GH13830
Drosophila grimshawi
FBgn0121306
N
0.757
GI11259
Drosophila mojavensis
FBgn0134020
N
0.784
GI11260
Drosophila mojavensis
FBgn0134021
N
0.784
GI20215
Drosophila mojavensis
FBgn0142951
N
0.784
GL26176
Drosophila persimilis
FBgn0163758
N
0.784
GM17378
Drosophila sechellia
FBgn0172288
N
0.757
GD24233
Drosophila simulans
FBgn0195582
N
0.757
GJ13600
Drosophila virilis
FBgn0200822
N
0.797
GF14433
Drosophila ananassae
FBgn0091460
N
0.784
GA10331-RA
Drosophila pseudoobscura
FBgn0070389
N
0.784
CG10466
Drosophila melanogaster
FBgn0032822
N
0.757
RBMX2
Pteropus vampyrus
ENSPVAG00000004425
N
0.959
Rbmx2
Rattus norvegicus
ENSRNOG00000007371
N
0.946
RBMX2
Sorex araneus
ENSSARG00000007350
N
0.892
RBMX2
Spermophilus tridecemlineatus
ENSSTOG00000015391
N
0.932
RBMX2
Taeniopygia guttata
ENSTGUG00000005239
N
0.784
RBMX2
Tetraodon nigroviridis
ENSTNIG00000007672
N
0.878
RBMX2
Takifugu rubripes
ENSTRUG00000001699
N
0.892
RBMX2
Tarsius syrichta
ENSTSYG00000010611
N
0.838
RBMX2
Tursiops truncatus
ENSTTRG00000016210
N
0.959
GK14925
Drosophila willistoni
FBgn0216930
N
0.784
GE13281
Drosophila yakuba
FBgn0230967
N
0.757
gw.130.169.1
Nematostella vectensis
gw.130.169.1
N
0.770
gw1.462.53.1
Capitella teleta
gw1.462.53.1
N
0.784
PredSwiss_CON1238.1
Pneumocystis carinii
PredSwiss_CON1238.1
N
0.757
Sjc_0109550
Schistosoma japonicum
Sjc_0109550
N
0.701
Ame_R006638
Ailuropoda melanoleuca
Ame_R006638
N
0.959
Smp_170230
Schistosoma mansoni
Smp_170230
N
0.701
XP_001180915.1
Strongylocentrotus purpuratus
XP_001180915.1
N
0.811
XP_002164481.1
Hydra magnipapillata
XP_002164481.1
N
0.811
XP_791635.2
Strongylocentrotus purpuratus
XP_791635.2
N
0.811
gw1.1.2244.1
Trichoplax adhaerens
gw1.1.2244.1
N
0.730
fgenesh2_pg.C_sca_10000115
Lottia gigantea
fgenesh2_pg.C_sca_10000115
N
0.757
estExt_Genewise1Plus.C_110324
Daphnia pulex
estExt_Genewise1Plus.C_110324
N
0.797
ISCW009356
Ixodes scapularis
ISCW009356
N
0.716
PHUM617480
Pediculus humanus
PHUM617480
N
0.784
145168
Helobdella robusta
145168
N
0.743
Aqu1.200557
Amphimedon queenslandica
Aqu1.200557
N
0.797
Aqu1.228439
Amphimedon queenslandica
Aqu1.228439
N
0.797
e_gw1.98.15.1
Volvox carteri
e_gw1.98.15.1
N
0.703
estExt_fgenesh1_pg.C_30395
Batrachochytrium dendrobatidis
estExt_fgenesh1_pg.C_30395
N
0.703
estExt_fgenesh1_pg.C_410012
Monosiga brevicollis
estExt_fgenesh1_pg.C_410012
N
0.716
estExt_fgenesh2_pg.C_1800064
Branchiostoma floridae
estExt_fgenesh2_pg.C_1800064
N
0.784
AAH56844
Xenopus laevis
AAH56844
N
0.714
ENSPPYG00000020717
Pongo pygmaeus
ENSPPYG00000020717
N
0.905
Bm1_02690
Brugia malayi
Bm1_02690
N
0.743
RBMX2
Cavia porcellus
ENSCPOG00000006640
N
0.946
ENSCSAVG00000001047
Ciona savignyi
ENSCSAVG00000001047
N
0.770
rbmx2
Danio rerio
ENSDARG00000044380
N
0.892
LOC100058600
Equus caballus
ENSECAG00000008257
N
0.959
RBMX2
Erinaceus europaeus
ENSEEUG00000000839
N
0.892
RBMX2
Echinops telfairi
ENSETEG00000001763
N
0.932
RBMX2
Homo sapiens
ENSG00000134597
N
0.959
RBMX2
Gasterosteus aculeatus
ENSGACG00000001855
N
0.851
RBMX2
Gallus gallus
ENSGALG00000004025
N
0.878
LOC100388331
Callithrix jacchus
ENSCJAG00000002436
N
1.000
LOC613705
Bos taurus
ENSBTAG00000014771
N
0.878
LOC534630
Bos taurus
ENSBTAG00000006252
N
0.878
CAOG_00327
Capsaspora owczarzaki
CAOG_00327
N
0.716
WUBG_13107
Wuchereria bancrofti
WUBG_13107
N
0.743
DGIL_AUG5s13597g2t1
Acyrtosiphon pisum
DGIL_AUG5s13597g2t1
N
0.716
nasonia_NCBI_hmm382923
Nasonia vitripennis
nasonia_NCBI_hmm382923
N
0.811
AAEL002461
Aedes aegypti
AAEL002461
N
0.757
AGAP000977
Anopheles gambiae
AGAP000977
N
0.757
C30B5.4
Caenorhabditis elegans
C30B5.4
N
0.703
CRE26315
Caenorhabditis remanei
CRE26315
N
0.703
RBMX2
Anolis carolinensis
ENSACAG00000008819
N
0.919
ENSGGOG00000016146
Gorilla gorilla
ENSGGOG00000016146
N
0.946
RBMX2
Gorilla gorilla
ENSGGOG00000023687
N
0.959
XM_001377711.1
Monodelphis domestica
ENSMODG00000012002
N
0.919
ENSMODG00000019800
Monodelphis domestica
ENSMODG00000019800
N
0.932
Rbmx2
Mus musculus
ENSMUSG00000031107
N
0.932
RBMX2
Ornithorhynchus anatinus
ENSOANG00000001362
N
0.905
RBMX2
Oryctolagus cuniculus
ENSOCUG00000011809
N
0.959
ENSOCUG00000020937
Oryctolagus cuniculus
ENSOCUG00000020937
N
0.766
ENSOGAG00000006237
Otolemur garnettii
ENSOGAG00000006237
N
0.959
ENSOGAG00000009060
Otolemur garnettii
ENSOGAG00000009060
N
0.892
RBMX2
Oryzias latipes
ENSORLG00000013183
N
0.865
ENSMODG00000011981
Monodelphis domestica
ENSMODG00000011981
N
0.784
XP_001110036.1
Macaca mulatta
ENSMMUG00000020845
N
0.946
RBMX2
Macaca mulatta
ENSMMUG00000008389
N
0.959
ENSGGOG00000026106
Gorilla gorilla
ENSGGOG00000026106
N
0.919
RBMX2
Loxodonta africana
ENSLAFG00000017625
N
0.959
ENSLAFG00000028277
Loxodonta africana
ENSLAFG00000028277
N
0.878
RBMX2
Macropus eugenii
ENSMEUG00000010913
N
0.946
RBMX2
Meleagris gallopavo
ENSMGAG00000001801
N
0.865
RBMX2
Microcebus murinus
ENSMICG00000015139
N
0.959
ENSMLUG00000010298
Myotis lucifugus
ENSMLUG00000010298
N
0.959
ENSMLUG00000017095
Myotis lucifugus
ENSMLUG00000017095
N
0.932
ENSMMUG00000001001
Macaca mulatta
ENSMMUG00000001001
N
0.851
RBMX2
Procavia capensis
ENSPCAG00000012903
N
0.892