RBM28 (Homo sapiens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSG00000106344 T37213_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM28
M047_0.6		 Homo sapiens GWGUAGD RNAcompete
Ray et al.(2013)
RNCMPT00049 		(Direct)

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M047_0.6 RRM 6 74
M047_0.6 RRM 116 185
M047_0.6 RRM 337 408
M047_0.6 RRM 489 567

RNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000223073 RRM 6 74
ENSP00000223073 RRM 116 185
ENSP00000223073 RRM 337 408
ENSP00000223073 RRM 489 567
ENSP00000390517 RRM 6 45
ENSP00000390517 RRM 196 267
ENSP00000390517 RRM 348 426
ENSP00000418071 RRM 6 74
ENSP00000418071 RRM 116 155
ENSP00000419840 RRM 143 184
ENSP00000420503 RRM 6 41
ENSP00000420503 RRM 63 108
ENSP00000420503 RRM 150 204

Links

Other RRM family RBPs
Other Homo sapiens RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBM28 Bos taurus ENSBTAG00000017001 I 0.921
Rbm28 Mus musculus ENSMUSG00000029701 I 0.891
ENSOANG00000000815 Ornithorhynchus anatinus ENSOANG00000000815 I 0.739
RBM28 Oryctolagus cuniculus ENSOCUG00000003009 I 0.903
RBM28 Otolemur garnettii ENSOGAG00000006011 I 0.880
ENSPPYG00000017975 Pongo pygmaeus ENSPPYG00000017975 I 0.997
RBM28 Pan troglodytes ENSPTRG00000019659 I 1.000
Rbm28 Rattus norvegicus ENSRNOG00000005468 I 0.900
RBM28 Sorex araneus ENSSARG00000008303 I 0.872
RBM28 Spermophilus tridecemlineatus ENSSTOG00000002169 I 0.799
RBM28 Tarsius syrichta ENSTSYG00000002892 I 0.818
RBM28 Tursiops truncatus ENSTTRG00000013647 I 0.935
RBM28 Monodelphis domestica ENSMODG00000015151 I 0.883
RBM28 Myotis lucifugus ENSMLUG00000002186 I 0.818
RBM28 Canis familiaris ENSCAFG00000001667 I 0.928
RBM28 Callithrix jacchus ENSCJAG00000017731 I 0.966
RBM28 Cavia porcellus ENSCPOG00000006253 I 0.928
RBM28 Dasypus novemcinctus ENSDNOG00000001124 I 0.838
LOC100071725 Equus caballus ENSECAG00000007745 I 0.935
RBM28 Erinaceus europaeus ENSEEUG00000002389 I 0.745
RBM28 Echinops telfairi ENSETEG00000007130 I 0.874
RBM28 Gorilla gorilla ENSGGOG00000004644 I 0.866
RBM28 Loxodonta africana ENSLAFG00000010717 I 0.921
RBM28 Macropus eugenii ENSMEUG00000009611 I 0.763
RBM28 Microcebus murinus ENSMICG00000000107 I 0.866
Ame_R001195 Ailuropoda melanoleuca Ame_R001195 I 0.928