RBM28 (Spermophilus tridecemlineatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSSTOG00000002169 T41560_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM28
M047_0.6 		Homo sapiens GWGUAGD RNAcompete
Ray et al.(2013)
RNCMPT00049 		0.799
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000001933 RRM 6 74
ENSSTOP00000001933 RRM 116 185
ENSSTOP00000001933 RRM 300 370
ENSSTOP00000001933 RRM 487 530

Links

Other RRM family RBPs
Other Spermophilus tridecemlineatus RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBM28 Myotis lucifugus ENSMLUG00000002186 I 0.915
Rbm28 Rattus norvegicus ENSRNOG00000005468 I 0.860
LOC100071725 Equus caballus ENSECAG00000007745 I 0.815
Ame_R001195 Ailuropoda melanoleuca Ame_R001195 I 0.808
RBM28 Canis familiaris ENSCAFG00000001667 I 0.808
ENSPPYG00000017975 Pongo pygmaeus ENSPPYG00000017975 I 0.802
RBM28 Callithrix jacchus ENSCJAG00000017731 I 0.802
RBM28 Tursiops truncatus ENSTTRG00000013647 I 0.799
RBM28 Pan troglodytes ENSPTRG00000019659 I 0.799
RBM28 Homo sapiens ENSG00000106344 D 0.799
RBM28 Bos taurus ENSBTAG00000017001 I 0.798
RBM28 Loxodonta africana ENSLAFG00000010717 I 0.798
RBM28 Cavia porcellus ENSCPOG00000006253 I 0.784
RBM28 Oryctolagus cuniculus ENSOCUG00000003009 I 0.781
Rbm28 Mus musculus ENSMUSG00000029701 I 0.777
RBM28 Echinops telfairi ENSETEG00000007130 I 0.771
RBM28 Monodelphis domestica ENSMODG00000015151 I 0.761
RBM28 Otolemur garnettii ENSOGAG00000006011 I 0.753
RBM28 Microcebus murinus ENSMICG00000000107 I 0.747
Rbm28 Dipodomys ordii ENSDORG00000004184 N 0.731
RBM28 Sorex araneus ENSSARG00000008303 I 0.720
RBM28 Dasypus novemcinctus ENSDNOG00000001124 I 0.713