RBM28 (Otolemur garnettii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOGAG00000006011 T39841_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM28
M047_0.6 		Homo sapiens GWGUAGD RNAcompete
Ray et al.(2013)
RNCMPT00049 		0.880
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000005376 RRM 6 74
ENSOGAP00000005376 RRM 122 185
ENSOGAP00000005376 RRM 340 408
ENSOGAP00000005376 RRM 492 571

Links

Other RRM family RBPs
Other Otolemur garnettii RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBM28 Microcebus murinus ENSMICG00000000107 I 0.915
ENSPPYG00000017975 Pongo pygmaeus ENSPPYG00000017975 I 0.883
RBM28 Callithrix jacchus ENSCJAG00000017731 I 0.883
LOC100071725 Equus caballus ENSECAG00000007745 I 0.883
RBM28 Homo sapiens ENSG00000106344 D 0.880
RBM28 Tursiops truncatus ENSTTRG00000013647 I 0.880
RBM28 Pan troglodytes ENSPTRG00000019659 I 0.880
Ame_R001195 Ailuropoda melanoleuca Ame_R001195 I 0.879
RBM28 Canis familiaris ENSCAFG00000001667 I 0.876
RBM28 Bos taurus ENSBTAG00000017001 I 0.875
RBM28 Cavia porcellus ENSCPOG00000006253 I 0.872
RBM28 Loxodonta africana ENSLAFG00000010717 I 0.862
RBM28 Oryctolagus cuniculus ENSOCUG00000003009 I 0.858
Rbm28 Mus musculus ENSMUSG00000029701 I 0.852
Rbm28 Rattus norvegicus ENSRNOG00000005468 I 0.841
RBM28 Echinops telfairi ENSETEG00000007130 I 0.829
RBM28 Monodelphis domestica ENSMODG00000015151 I 0.825
RBM28 Tarsius syrichta ENSTSYG00000002892 I 0.818
RBM28 Sorex araneus ENSSARG00000008303 I 0.811
RBM28 Dasypus novemcinctus ENSDNOG00000001124 I 0.789
RBM28 Myotis lucifugus ENSMLUG00000002186 I 0.772
RBM28 Gorilla gorilla ENSGGOG00000004644 I 0.756
RBM28 Spermophilus tridecemlineatus ENSSTOG00000002169 I 0.753
RBM28 Macropus eugenii ENSMEUG00000009611 I 0.717