RBM23 (Gasterosteus aculeatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGACG00000003376 T37410_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000004422 RRM 170 238
ENSGACP00000004422 RRM 271 341
ENSGACP00000004422 RRM 456 511

Links

Other RRM family RBPs
Other Gasterosteus aculeatus RBPs

52 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH77813 Xenopus laevis AAH77813 N 0.859
RBM39 Tupaia belangeri ENSTBEG00000017320 N 0.782
RBM39 Sus scrofa ENSSSCG00000007309 N 0.879
RBM39 Sorex araneus ENSSARG00000007673 N 0.879
Rbm39 Rattus norvegicus ENSRNOG00000019848 N 0.879
RBM39 Pteropus vampyrus ENSPVAG00000014944 N 0.879
RBM39 Pan troglodytes ENSPTRG00000013449 N 0.879
ENSPPYG00000010963 Pongo pygmaeus ENSPPYG00000010963 N 0.879
RBM39 Procavia capensis ENSPCAG00000008764 N 0.783
RBM23 Oryzias latipes ENSORLG00000010370 N 0.893
RBM23 Oryzias latipes ENSORLG00000009919 N 0.918
RBM39 Otolemur garnettii ENSOGAG00000011227 N 0.808
RBM39 Taeniopygia guttata ENSTGUG00000003048 N 0.883
RBM23 Tetraodon nigroviridis ENSTNIG00000005223 N 0.847
AAH75146 Xenopus laevis AAH75146 N 0.848
Ame_R004270 Ailuropoda melanoleuca Ame_R004270 N 0.879
estExt_Genewise1Plus.C_150014 Daphnia pulex estExt_Genewise1Plus.C_150014 N 0.736
estExt_Genewise1.C_sca_90322 Lottia gigantea estExt_Genewise1.C_sca_90322 N 0.727
PHUM394230 Pediculus humanus PHUM394230 N 0.727
GK15272 Drosophila willistoni FBgn0217277 N 0.704
rbm39 Xenopus tropicalis ENSXETG00000007434 N 0.864
RBM39 Tursiops truncatus ENSTTRG00000017039 N 0.879
RBM39 Tarsius syrichta ENSTSYG00000005605 N 0.879
RBM23 Takifugu rubripes ENSTRUG00000011352 N 0.898
RBM23 Tetraodon nigroviridis ENSTNIG00000017904 N 0.903
B7NZJ5_RABIT Oryctolagus cuniculus ENSOCUG00000007050 N 0.879
Rbm39 Mus musculus ENSMUSG00000027620 N 0.879
RBM39 Cavia porcellus ENSCPOG00000014625 N 0.819
B0KWM7_CALJA Callithrix jacchus ENSCJAG00000017535 N 0.879
RBM39 Canis familiaris ENSCAFG00000008327 N 0.879
Q2HJD8_BOVIN Bos taurus ENSBTAG00000003949 N 0.879
RBM39 Anolis carolinensis ENSACAG00000006436 N 0.888
CPIJ019416 Culex quinquefasciatus CPIJ019416 N 0.742
CPIJ014704 Culex quinquefasciatus CPIJ014704 N 0.742
AGAP008433 Anopheles gambiae AGAP008433 N 0.722
AAEL005046 Aedes aegypti AAEL005046 N 0.731
amel4_ncbi_hmm11379 Apis mellifera amel4_ncbi_hmm11379 N 0.722
CpipJ_CPIJ019416 Culex pipiens CpipJ_CPIJ019416 N 0.742
ENSCPOG00000021775 Cavia porcellus ENSCPOG00000021775 N 0.778
rbm39a Danio rerio ENSDARG00000011613 N 0.888
RBM39 Monodelphis domestica ENSMODG00000001557 N 0.870
RBM39 Microcebus murinus ENSMICG00000001668 N 0.879
RBM39 Meleagris gallopavo ENSMGAG00000001509 N 0.878
RBM39 Loxodonta africana ENSLAFG00000010346 N 0.879
RBM39 Gorilla gorilla ENSGGOG00000003950 N 0.854
RBM39 Gallus gallus ENSGALG00000001550 N 0.883
RBM23 Gasterosteus aculeatus ENSGACG00000002797 N 0.859
RBM39 Homo sapiens ENSG00000131051 N 0.879
RBM39 Echinops telfairi ENSETEG00000016295 N 0.783
RBM39 Equus caballus ENSECAG00000013423 N 0.879
rbm39b Danio rerio ENSDARG00000041853 N 0.867
CpipJ_CPIJ014704 Culex pipiens CpipJ_CPIJ014704 N 0.742