ENSXETG00000021745 (Xenopus tropicalis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSXETG00000021745 T42939_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
aret_CONSTRUCT
M229_0.6 		RNAcompete CONSTRUCTS UKUGUGU RNAcompete
Ray et al.(2013)
RNCMPT00270 		0.761
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXETP00000047017 RRM 86 156

Links

Other RRM family RBPs
Other Xenopus tropicalis RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
aret Drosophila melanogaster FBgn0000114 D 0.000
bru-3 Drosophila melanogaster FBgn0262350 D 0.000
LOAG_05508 Loa loa LOAG_05508 I 0.000
GH14684 Drosophila grimshawi FBgn0122160 I 0.000
GI13095 Drosophila mojavensis FBgn0135852 I 0.000
GL21647 Drosophila persimilis FBgn0159240 I 0.000
GM24582 Drosophila sechellia FBgn0179445 I 0.000
GD12651 Drosophila simulans FBgn0184378 I 0.000
GJ13842 Drosophila virilis FBgn0201061 I 0.000
GK17101 Drosophila willistoni FBgn0219100 I 0.000
GE20053 Drosophila yakuba FBgn0237378 I 0.000
GA28624-RA Drosophila pseudoobscura FBgn0249984 I 0.000
FBgn0262475 Drosophila melanogaster FBgn0262475 I 0.000
PHUM315130 Pediculus humanus PHUM315130 I 0.000
estExt_fgenesh2_pm.C_730008 Branchiostoma floridae estExt_fgenesh2_pm.C_730008 I 0.000
GG13757 Drosophila erecta FBgn0106020 I 0.000
GF10965 Drosophila ananassae FBgn0088005 I 0.000
AAEL000695 Aedes aegypti AAEL000695 I 0.000
AAEL014033 Aedes aegypti AAEL014033 I 0.000
AGAP004950 Anopheles gambiae AGAP004950 I 0.000
CPIJ016329 Culex quinquefasciatus CPIJ016329 I 0.000
Q2KI16_BOVIN Bos taurus ENSBTAG00000008937 I 0.000
BGIBMGA010431 Bombyx mori BGIBMGA010431 I 0.000
LOC100391960 Callithrix jacchus ENSCJAG00000020663 I 0.845
CELF2 Gorilla gorilla ENSGGOG00000009330 I 0.000
Celf6 Mus musculus ENSMUSG00000032297 I 0.000
CELF2 Ornithorhynchus anatinus ENSOANG00000015432 I 0.000
CELF5 Takifugu rubripes ENSTRUG00000017937 I 0.000
CELF6 Ochotona princeps ENSOPRG00000019169 I 0.000
CELF5 Tetraodon nigroviridis ENSTNIG00000010634 I 0.000
PHUM533900 Pediculus humanus PHUM533900 N 0.000
GL18622 Drosophila persimilis FBgn0156223 N 0.000
AGAP009477 Anopheles gambiae AGAP009477 N 0.000
GA25731-RA Drosophila pseudoobscura FBgn0247108 N 0.000
GE18585 Drosophila yakuba FBgn0235992 N 0.000