SB09G021560 (Sorghum bicolor)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Sb09g021560 T46074_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Sb09g021560.1 RRM 8 66
Sb09g021560.1 RRM 111 172
Sb09g021560.1 RRM 259 325
Sb09g021560.1 RRM 369 435

Links

Other RRM family RBPs
Other Sorghum bicolor RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK14373.1 Cannabis sativa PK14373.1 N 0.753
cassava19038.valid.m1 Manihot esculenta cassava19038.valid.m1 N 0.727
cassava19039.valid.m1 Manihot esculenta cassava19039.valid.m1 N 0.727
cassava19040.valid.m1 Manihot esculenta cassava19040.valid.m1 N 0.727
Cucsa.365870 Cucumis sativus Cucsa.365870 N 0.725
Glyma02g08870.1 Glycine max Glyma02g08870.1 N 0.718
Glyma20g30820.1 Glycine max Glyma20g30820.1 N 0.710
mgf010164m Mimulus guttatus mgf010164m N 0.713
GRMZM2G052926 Zea mays GRMZM2G052926 N 0.957
GRMZM2G070113 Zea mays GRMZM2G070113 N 0.965
PDK_20s1358001g002 Phoenix dactylifera PDK_20s1358001g002 N 0.723
cassava19037.valid.m1 Manihot esculenta cassava19037.valid.m1 N 0.727
cassava12743.valid.m1 Manihot esculenta cassava12743.valid.m1 N 0.727
XM_002893897.1 Arabidopsis lyrata Al_scaffold_0001_3801 N 0.715
PTB3 Arabidopsis thaliana AT1G43190-TAIR-G N 0.730
BRADI2G24150 Brachypodium distachyon BRADI2G24150 N 0.902
BRADI2G56120 Brachypodium distachyon BRADI2G56120 N 0.792
GSVIVG00034558001 Vitis vinifera GSVIVG00034558001 N 0.728
LOC_Os01g64770 Oryza sativa LOC_Os01g64770 N 0.744
LOC_Os05g36120 Oryza sativa LOC_Os05g36120 N 0.876
B9GT89_POPTR Populus trichocarpa POPTR_0002s06660 N 0.707
B9H7U5_POPTR Populus trichocarpa POPTR_0005s21660 N 0.729
29863.m001059 Ricinus communis 29863.m001059 N 0.721
ppa005775m Prunus persica ppa005775m N 0.765