CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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NOP15
(
Saccharomyces cerevisiae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
YNL110C
T46361_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
YNL110C
RRM
93
163
IYVSRLPHGFHEKELSKYFAQFGDLKEVRLARNKKTGNSRHYGFLEFVNKEDAMIAQESMNNYLLMGHLLQ
Links
Other
RRM
family RBPs
Other
Saccharomyces cerevisiae
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
P52299
Xenopus laevis
P52299
N
0.000
ncbp2
Xenopus tropicalis
ENSXETG00000019384
N
0.000
NCBP2
Vicugna pacos
ENSVPAG00000010369
N
0.000
NCBP2
Tursiops truncatus
ENSTTRG00000013908
N
0.000
NCBP2
Takifugu rubripes
ENSTRUG00000018355
N
0.000
NCBP2
Tetraodon nigroviridis
ENSTNIG00000006065
N
0.000
NCBP2
Taeniopygia guttata
ENSTGUG00000008864
N
0.000
B5G279_TAEGU
Taeniopygia guttata
ENSTGUG00000007323
N
0.000
NCBP2
Tupaia belangeri
ENSTBEG00000015222
N
0.000
ENSSTOG00000001584
Spermophilus tridecemlineatus
ENSSTOG00000001584
N
0.000
NCBP2L
Sus scrofa
ENSSSCG00000012562
N
0.000
ENSSSCG00000011840
Sus scrofa
ENSSSCG00000011840
N
0.000
ENSSSCG00000011835
Sus scrofa
ENSSSCG00000011835
N
0.000
Pigz
Rattus norvegicus
ENSRNOG00000001746
N
0.000
NCBP2
Pteropus vampyrus
ENSPVAG00000017273
N
0.000
NCBP2
Pan troglodytes
ENSPTRG00000015789
N
0.000
Cbp20
Drosophila melanogaster
FBgn0022943
N
0.000
GA11577-RA
Drosophila pseudoobscura
FBgn0071628
N
0.000
GF16759
Drosophila ananassae
FBgn0093780
N
0.000
CAA59259
Xenopus laevis
CAA59259
N
0.000
AAH72902
Xenopus laevis
AAH72902
N
0.000
2118330B
Xenopus laevis
2118330B
N
0.000
Ame_R004608
Ailuropoda melanoleuca
Ame_R004608
N
0.000
estExt_Genewise1.C_sca_180152
Lottia gigantea
estExt_Genewise1.C_sca_180152
N
0.000
GE25514
Drosophila yakuba
FBgn0242580
N
0.000
GK11244
Drosophila willistoni
FBgn0213255
N
0.000
GJ23276
Drosophila virilis
FBgn0210378
N
0.000
GJ18756
Drosophila virilis
FBgn0205908
N
0.000
GD19204
Drosophila simulans
FBgn0190709
N
0.000
GM15280
Drosophila sechellia
FBgn0170200
N
0.000
GL12592
Drosophila persimilis
FBgn0150198
N
0.000
GI23717
Drosophila mojavensis
FBgn0146442
N
0.000
GH15101
Drosophila grimshawi
FBgn0122576
N
0.000
GG22670
Drosophila erecta
FBgn0114835
N
0.000
ENSPPYG00000014449
Pongo pygmaeus
ENSPPYG00000014449
N
0.000
NCBP2
Procavia capensis
ENSPCAG00000003219
N
0.000
NCBP2
Oryzias latipes
ENSORLG00000011235
N
0.000
NCBP2
Loxodonta africana
ENSLAFG00000006372
N
0.000
NCBP2
Gallus gallus
ENSGALG00000006843
N
0.000
NCBP2_CHICK
Gallus gallus
ENSGALG00000005753
N
0.000
NCBP2
Gasterosteus aculeatus
ENSGACG00000006238
N
0.000
NCBP2
Homo sapiens
ENSG00000114503
N
0.000
NCBP2
Equus caballus
ENSECAG00000016153
N
0.000
ncbp2
Danio rerio
ENSDARG00000014898
N
0.000
NCBP2
Cavia porcellus
ENSCPOG00000002976
N
0.000
LOC100404338
Callithrix jacchus
ENSCJAG00000013735
N
0.000
ENSCHOG00000005967
Choloepus hoffmanni
ENSCHOG00000005967
N
0.000
NCBP2L
Canis familiaris
ENSCAFG00000017990
N
0.000
NCBP2
Canis familiaris
ENSCAFG00000013100
N
0.000
NCBP2_BOVIN
Bos taurus
ENSBTAG00000008873
N
0.000
ENSACAG00000015128
Anolis carolinensis
ENSACAG00000015128
N
0.000
NCBP2_ANOGA
Anopheles gambiae
AGAP002547
N
0.000
NCBP2L
Loxodonta africana
ENSLAFG00000027581
N
0.000
ENSMEUG00000004730
Macropus eugenii
ENSMEUG00000004730
N
0.000
ENSMEUG00000008126
Macropus eugenii
ENSMEUG00000008126
N
0.000
ENSOPRG00000007634
Ochotona princeps
ENSOPRG00000007634
N
0.000
NCBP2
Otolemur garnettii
ENSOGAG00000005009
N
0.000
ENSOCUG00000014372
Oryctolagus cuniculus
ENSOCUG00000014372
N
0.000
NCBP2
Oryctolagus cuniculus
ENSOCUG00000006738
N
0.000
Ncbp2
Mus musculus
ENSMUSG00000022774
N
0.000
LOC100020122
Monodelphis domestica
ENSMODG00000024608
N
0.000
XM_001367531.1
Monodelphis domestica
ENSMODG00000024607
N
0.000
XM_001371285.1
Monodelphis domestica
ENSMODG00000023276
N
0.000
XM_001373408.1
Monodelphis domestica
ENSMODG00000015908
N
0.000
NCBP2
Macaca mulatta
ENSMMUG00000007825
N
0.000
NCBP2
Myotis lucifugus
ENSMLUG00000017500
N
0.000
NCBP2L
Microcebus murinus
ENSMICG00000016081
N
0.000
NCBP2
Microcebus murinus
ENSMICG00000003162
N
0.000
ENSMGAG00000006728
Meleagris gallopavo
ENSMGAG00000006728
N
0.000
ENSMGAG00000002257
Meleagris gallopavo
ENSMGAG00000002257
N
0.000
nasonia_NCBI_hmm1532803
Nasonia vitripennis
nasonia_NCBI_hmm1532803
N
0.000