NCBP2 (Gasterosteus aculeatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGACG00000006238 T37438_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000008263 RRM 42 112

Links

Other RRM family RBPs
Other Gasterosteus aculeatus RBPs

93 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
NCBP2 Takifugu rubripes ENSTRUG00000018355 N 0.930
NCBP2 Tetraodon nigroviridis ENSTNIG00000006065 N 0.915
NCBP2 Oryzias latipes ENSORLG00000011235 N 0.873
ncbp2 Xenopus tropicalis ENSXETG00000019384 N 0.873
P52299 Xenopus laevis P52299 N 0.873
AAH72902 Xenopus laevis AAH72902 N 0.873
ncbp2 Danio rerio ENSDARG00000014898 N 0.859
2118330B Xenopus laevis 2118330B N 0.859
CAA59259 Xenopus laevis CAA59259 N 0.859
ENSACAG00000015128 Anolis carolinensis ENSACAG00000015128 N 0.831
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.831
NCBP2 Procavia capensis ENSPCAG00000003219 N 0.817
NCBP2 Cavia porcellus ENSCPOG00000002976 N 0.817
NCBP2_CHICK Gallus gallus ENSGALG00000005753 N 0.817
NCBP2 Oryctolagus cuniculus ENSOCUG00000006738 N 0.817
ENSSTOG00000001584 Spermophilus tridecemlineatus ENSSTOG00000001584 N 0.817
XM_001373408.1 Monodelphis domestica ENSMODG00000015908 N 0.817
ENSMGAG00000006728 Meleagris gallopavo ENSMGAG00000006728 N 0.817
XM_001371285.1 Monodelphis domestica ENSMODG00000023276 N 0.817
ENSMEUG00000008126 Macropus eugenii ENSMEUG00000008126 N 0.817
ENSMGAG00000002257 Meleagris gallopavo ENSMGAG00000002257 N 0.817
NCBP2 Gallus gallus ENSGALG00000006843 N 0.817
Ncbp2 Mus musculus ENSMUSG00000022774 N 0.803
NCBP2 Tursiops truncatus ENSTTRG00000013908 N 0.803
NCBP2 Macaca mulatta ENSMMUG00000007825 N 0.803
NCBP2 Microcebus murinus ENSMICG00000003162 N 0.803
NCBP2 Loxodonta africana ENSLAFG00000006372 N 0.803
NCBP2_BOVIN Bos taurus ENSBTAG00000008873 N 0.803
NCBP2 Homo sapiens ENSG00000114503 N 0.803
NCBP2 Canis familiaris ENSCAFG00000013100 N 0.803
LOC100404338 Callithrix jacchus ENSCJAG00000013735 N 0.803
ENSMEUG00000004730 Macropus eugenii ENSMEUG00000004730 N 0.803
NCBP2 Myotis lucifugus ENSMLUG00000017500 N 0.803
ENSPPYG00000014449 Pongo pygmaeus ENSPPYG00000014449 N 0.803
NCBP2 Taeniopygia guttata ENSTGUG00000008864 N 0.803
ENSOPRG00000007634 Ochotona princeps ENSOPRG00000007634 N 0.803
NCBP2 Otolemur garnettii ENSOGAG00000005009 N 0.803
ENSOCUG00000014372 Oryctolagus cuniculus ENSOCUG00000014372 N 0.803
Pigz Rattus norvegicus ENSRNOG00000001746 N 0.803
NCBP2 Pan troglodytes ENSPTRG00000015789 N 0.803
ENSSSCG00000011835 Sus scrofa ENSSSCG00000011835 N 0.803
ENSSSCG00000011840 Sus scrofa ENSSSCG00000011840 N 0.803
Ame_R004608 Ailuropoda melanoleuca Ame_R004608 N 0.803
NCBP2 Tupaia belangeri ENSTBEG00000015222 N 0.803
NCBP2 Equus caballus ENSECAG00000016153 N 0.803
LOC100020122 Monodelphis domestica ENSMODG00000024608 N 0.789
NCBP2 Vicugna pacos ENSVPAG00000010369 N 0.789
ENSCHOG00000005967 Choloepus hoffmanni ENSCHOG00000005967 N 0.789
XM_001367531.1 Monodelphis domestica ENSMODG00000024607 N 0.789
NCBP2 Pteropus vampyrus ENSPVAG00000017273 N 0.789
GK11244 Drosophila willistoni FBgn0213255 N 0.775
GI23717 Drosophila mojavensis FBgn0146442 N 0.775
GH15101 Drosophila grimshawi FBgn0122576 N 0.775
GJ23276 Drosophila virilis FBgn0210378 N 0.775
GF16759 Drosophila ananassae FBgn0093780 N 0.775
XP_002166119.1 Hydra magnipapillata XP_002166119.1 N 0.761
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.761
nasonia_NCBI_hmm134534 Nasonia vitripennis nasonia_NCBI_hmm134534 N 0.761
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.761
NCBP2_ANOGA Anopheles gambiae AGAP002547 N 0.761
GD19204 Drosophila simulans FBgn0190709 N 0.761
GL12592 Drosophila persimilis FBgn0150198 N 0.761
GM15280 Drosophila sechellia FBgn0170200 N 0.761
GG22670 Drosophila erecta FBgn0114835 N 0.761
GA11577-RA Drosophila pseudoobscura FBgn0071628 N 0.761
Cbp20 Drosophila melanogaster FBgn0022943 N 0.761
GE25514 Drosophila yakuba FBgn0242580 N 0.761
91084 Helobdella robusta 91084 N 0.761
DGIL_AUG5s12516g4t1 Acyrtosiphon pisum DGIL_AUG5s12516g4t1 N 0.746
NCBP2_AEDAE Aedes aegypti AAEL006135 N 0.746
GJ18756 Drosophila virilis FBgn0205908 N 0.746
estExt_Genewise1.C_sca_180152 Lottia gigantea estExt_Genewise1.C_sca_180152 N 0.746
NCBP2L Loxodonta africana ENSLAFG00000027581 N 0.746
XP_002160076.1 Hydra magnipapillata XP_002160076.1 N 0.746
estExt_Genewise1.C_5160046 Capitella teleta estExt_Genewise1.C_5160046 N 0.732
NCBP2 Sorex araneus ENSSARG00000014294 N 0.732
PHUM535920 Pediculus humanus PHUM535920 N 0.732
NCBP2_CULQU Culex quinquefasciatus CPIJ003555 N 0.732
CpipJ_CPIJ003555 Culex pipiens CpipJ_CPIJ003555 N 0.732
ENSCING00000016926 Ciona intestinalis ENSCING00000016926 N 0.718
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.718
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.718
estExt_gwp.C_920142 Nematostella vectensis estExt_gwp.C_920142 N 0.718
LOAG_03270 Loa loa LOAG_03270 N 0.718
ENSCING00000003079 Ciona intestinalis ENSCING00000003079 N 0.718
WUBG_16568 Wuchereria bancrofti WUBG_16568 N 0.718
DGIL_AUG5s15103g4t1 Acyrtosiphon pisum DGIL_AUG5s15103g4t1 N 0.718
NCBP2_IXOSC Ixodes scapularis ISCW017479 N 0.704
Bm1_02935 Brugia malayi Bm1_02935 N 0.704
NCBP2L Equus caballus ENSECAG00000003478 N 0.704
estExt_fgenesh1_kg.C_1730002 Daphnia pulex estExt_fgenesh1_kg.C_1730002 N 0.704
BGIBMGA007585 Bombyx mori BGIBMGA007585 N 0.704
e_gw1.1.927.1 Trichoplax adhaerens e_gw1.1.927.1 N 0.704