nasonia_NCBI_hmm1532803 (Nasonia vitripennis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 nasonia_NCBI_hmm1532803 T32154_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
nasonia_NCBI_hmm1532803 RRM 35 105

Links

Other RRM family RBPs
Other Nasonia vitripennis RBPs

177 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.944
NCBP2 Tursiops truncatus ENSTTRG00000013908 N 0.915
PHUM535920 Pediculus humanus PHUM535920 N 0.915
NCBP2 Microcebus murinus ENSMICG00000003162 N 0.901
Pigz Rattus norvegicus ENSRNOG00000001746 N 0.901
Ame_R004608 Ailuropoda melanoleuca Ame_R004608 N 0.901
LOC100404338 Callithrix jacchus ENSCJAG00000013735 N 0.901
NCBP2 Oryctolagus cuniculus ENSOCUG00000006738 N 0.901
NCBP2 Homo sapiens ENSG00000114503 N 0.901
ENSMEUG00000008126 Macropus eugenii ENSMEUG00000008126 N 0.901
ENSPPYG00000014449 Pongo pygmaeus ENSPPYG00000014449 N 0.901
NCBP2 Myotis lucifugus ENSMLUG00000017500 N 0.901
NCBP2 Equus caballus ENSECAG00000016153 N 0.901
NCBP2 Pan troglodytes ENSPTRG00000015789 N 0.901
NCBP2 Macaca mulatta ENSMMUG00000007825 N 0.901
NCBP2 Tupaia belangeri ENSTBEG00000015222 N 0.901
Ncbp2 Mus musculus ENSMUSG00000022774 N 0.901
XM_001371285.1 Monodelphis domestica ENSMODG00000023276 N 0.901
nasonia_NCBI_hmm134534 Nasonia vitripennis nasonia_NCBI_hmm134534 N 0.901
NCBP2 Otolemur garnettii ENSOGAG00000005009 N 0.901
ENSSTOG00000001584 Spermophilus tridecemlineatus ENSSTOG00000001584 N 0.901
ENSSSCG00000011835 Sus scrofa ENSSSCG00000011835 N 0.901
ENSSSCG00000011840 Sus scrofa ENSSSCG00000011840 N 0.901
NCBP2 Canis familiaris ENSCAFG00000013100 N 0.901
NCBP2_BOVIN Bos taurus ENSBTAG00000008873 N 0.901
ENSMEUG00000004730 Macropus eugenii ENSMEUG00000004730 N 0.887
ENSOCUG00000014372 Oryctolagus cuniculus ENSOCUG00000014372 N 0.887
BGIBMGA007585 Bombyx mori BGIBMGA007585 N 0.887
NCBP2 Loxodonta africana ENSLAFG00000006372 N 0.887
NCBP2 Pteropus vampyrus ENSPVAG00000017273 N 0.887
NCBP2 Vicugna pacos ENSVPAG00000010369 N 0.887
ENSCHOG00000005967 Choloepus hoffmanni ENSCHOG00000005967 N 0.887
ENSOPRG00000007634 Ochotona princeps ENSOPRG00000007634 N 0.887
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.873
LOC100020122 Monodelphis domestica ENSMODG00000024608 N 0.873
NCBP2 Procavia capensis ENSPCAG00000003219 N 0.873
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.873
XM_001373408.1 Monodelphis domestica ENSMODG00000015908 N 0.873
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.873
XM_001367531.1 Monodelphis domestica ENSMODG00000024607 N 0.873
NCBP2 Cavia porcellus ENSCPOG00000002976 N 0.873
NCBP2_CHICK Gallus gallus ENSGALG00000005753 N 0.859
NCBP2 Gallus gallus ENSGALG00000006843 N 0.859
ENSMGAG00000002257 Meleagris gallopavo ENSMGAG00000002257 N 0.859
ENSMGAG00000006728 Meleagris gallopavo ENSMGAG00000006728 N 0.859
NCBP2 Taeniopygia guttata ENSTGUG00000008864 N 0.845
NCBP2_ANOGA Anopheles gambiae AGAP002547 N 0.845
DGIL_AUG5s12516g4t1 Acyrtosiphon pisum DGIL_AUG5s12516g4t1 N 0.845
NCBP2_AEDAE Aedes aegypti AAEL006135 N 0.831
WUBG_16568 Wuchereria bancrofti WUBG_16568 N 0.831
AAH72902 Xenopus laevis AAH72902 N 0.831
NCBP2 Takifugu rubripes ENSTRUG00000018355 N 0.831
ncbp2 Danio rerio ENSDARG00000014898 N 0.831
LOAG_03270 Loa loa LOAG_03270 N 0.831
ENSACAG00000015128 Anolis carolinensis ENSACAG00000015128 N 0.831
P52299 Xenopus laevis P52299 N 0.831
XP_002160076.1 Hydra magnipapillata XP_002160076.1 N 0.831
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.817
Bm1_02935 Brugia malayi Bm1_02935 N 0.817
ncbp2 Xenopus tropicalis ENSXETG00000019384 N 0.817
2118330B Xenopus laevis 2118330B N 0.817
CAA59259 Xenopus laevis CAA59259 N 0.817
DGIL_AUG5s15103g4t1 Acyrtosiphon pisum DGIL_AUG5s15103g4t1 N 0.817
NCBP2 Oryzias latipes ENSORLG00000011235 N 0.817
CpipJ_CPIJ003555 Culex pipiens CpipJ_CPIJ003555 N 0.817
NCBP2_CULQU Culex quinquefasciatus CPIJ003555 N 0.817
NCBP2 Tetraodon nigroviridis ENSTNIG00000006065 N 0.817
NCBP2_IXOSC Ixodes scapularis ISCW017479 N 0.803
91084 Helobdella robusta 91084 N 0.803
estExt_Genewise1.C_sca_180152 Lottia gigantea estExt_Genewise1.C_sca_180152 N 0.803
XP_002166119.1 Hydra magnipapillata XP_002166119.1 N 0.803
GJ23276 Drosophila virilis FBgn0210378 N 0.803
ENSCING00000016926 Ciona intestinalis ENSCING00000016926 N 0.803
GG22670 Drosophila erecta FBgn0114835 N 0.803
NCBP2 Sorex araneus ENSSARG00000014294 N 0.803
GF16759 Drosophila ananassae FBgn0093780 N 0.803
GH15101 Drosophila grimshawi FBgn0122576 N 0.803
GI23717 Drosophila mojavensis FBgn0146442 N 0.803
ENSCING00000003079 Ciona intestinalis ENSCING00000003079 N 0.803
XP_802051.1 Strongylocentrotus purpuratus XP_802051.1 N 0.789
XP_001187788.1 Strongylocentrotus purpuratus XP_001187788.1 N 0.789
estExt_gwp.C_920142 Nematostella vectensis estExt_gwp.C_920142 N 0.789
Cbp20 Drosophila melanogaster FBgn0022943 N 0.789
e_gw1.17.191.1 Trichoderma reesei e_gw1.17.191.1 N 0.789
GA11577-RA Drosophila pseudoobscura FBgn0071628 N 0.789
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.789
GE25514 Drosophila yakuba FBgn0242580 N 0.789
GK11244 Drosophila willistoni FBgn0213255 N 0.789
GD19204 Drosophila simulans FBgn0190709 N 0.789
GL12592 Drosophila persimilis FBgn0150198 N 0.789
GM15280 Drosophila sechellia FBgn0170200 N 0.789
NCBP2L Loxodonta africana ENSLAFG00000027581 N 0.789
e_gw1.10.746.1 Trichoderma virens e_gw1.10.746.1 N 0.775
estExt_Genewise1.C_5160046 Capitella teleta estExt_Genewise1.C_5160046 N 0.775
estExt_fgenesh1_kg.C_1730002 Daphnia pulex estExt_fgenesh1_kg.C_1730002 N 0.775
ENSCSAVG00000005823 Ciona savignyi ENSCSAVG00000005823 N 0.775
fgeneshMC_pm.5_#_40 Mucor circinelloides fgeneshMC_pm.5_#_40 N 0.775
GJ18756 Drosophila virilis FBgn0205908 N 0.775
estExt_Genewise1Plus.C_40730 Myceliophthora thermophila estExt_Genewise1Plus.C_40730 N 0.761
estExt_Genewise1Plus.C_50921 Neurospora discreta estExt_Genewise1Plus.C_50921 N 0.761
AMAG_02834 Allomyces macrogynus AMAG_02834 N 0.761
BC1G_04395 Botrytis cinerea BC1G_04395 N 0.761
SS1G_13629 Sclerotinia sclerotiorum SS1G_13629 N 0.761
NCU00210 Neurospora crassa NCU00210 N 0.761
NFIA_084190 Neosartorya fischeri CADNFIAG00008064 N 0.761
e_gw1.18.125.1 Batrachochytrium dendrobatidis e_gw1.18.125.1 N 0.761
AFUA_2G08570 Aspergillus fumigatus CADAFUAG00004718 N 0.761
NCBP2 Gasterosteus aculeatus ENSGACG00000006238 N 0.761
e_gw1.3.1174.1 Thielavia terrestris e_gw1.3.1174.1 N 0.761
fgenesh1_pm.00772_#_82 Aspergillus carbonarius fgenesh1_pm.00772_#_82 N 0.746
FVEG_07036 Fusarium verticillioides FVEG_07036 N 0.746
TESG_01120 Trichophyton tonsurans TESG_01120 N 0.746
TERG_03424 Trichophyton rubrum TERG_03424 N 0.746
An12g03930 Aspergillus niger CADANGAG00009835 N 0.746
CIMG_00837 Coccidioides immitis CIMG_00837 N 0.746
BDBG_08091 Blastomyces dermatitidis BDBG_08091 N 0.746
CPSG_08054 Coccidioides posadasii CPSG_08054 N 0.746
Pa_7_2520 Podospora anserina Pa_7_2520 N 0.746
TEQG_01953 Trichophyton equinum TEQG_01953 N 0.746
MCYG_04468 Microsporum canis MCYG_04468 N 0.746
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 Nectria haematococca estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 N 0.746
MGYG_02166 Microsporum gypseum MGYG_02166 N 0.746
estExt_Genewise1.C_10147 Cochliobolus heterostrophus C5 estExt_Genewise1.C_10147 N 0.746
PABG_07236 Paracoccidioides brasiliensis PABG_07236 N 0.746
e_gw1.1.927.1 Trichoplax adhaerens e_gw1.1.927.1 N 0.746
SNOG_09598 Stagonospora nodorum SNOG_09598 N 0.746
PTRG_00402 Pyrenophora tritici repentis PTRG_00402 N 0.746
estExt_Genewise1Plus.C_150343 Trichoderma atroviride estExt_Genewise1Plus.C_150343 N 0.746
NCBP2L Sus scrofa ENSSSCG00000012562 N 0.746
EAT82863.2 Phaeosphaeria nodorum EAT82863.2 N 0.746
HCAG_07341 Histoplasma capsulatum HCAG_07341 N 0.746
MGG_06296 Magnaporthe oryzae MGG_06296 N 0.746
GLRG_00177 Colletotrichum graminicola GLRG_00177 N 0.746
fgenesh1_pg.C_scaffold_1000747 Cryphonectria parasitica fgenesh1_pg.C_scaffold_1000747 N 0.732
GSTUMT00010626001 Tuber melanosporum GSTUMT00010626001 N 0.732
Aqu1.228507 Amphimedon queenslandica Aqu1.228507 N 0.732
SNAPOd2T00014922001 Oikopleura dioica SNAPOd2T00014922001 N 0.732
EFA74823.1 Polysphondylium pallidum EFA74823.1 N 0.732
ncbp2 Dictyostelium discoideum DDB_G0287197 N 0.732
PMAA_070830 Penicillium marneffei PMAA_070830 N 0.732
Pc13g04070 Penicillium chrysogenum Pc13g04070 N 0.732
Sjc_0008080 Schistosoma japonicum Sjc_0008080 N 0.732
NCBP2L Canis familiaris ENSCAFG00000017990 N 0.732
GID1.0044779 Dictyostelium purpureum GID1.0044779 N 0.732
PGTG_01720 Puccinia graminis PGTG_01720 N 0.718
SOCG_01831 Schizosaccharomyces octosporus SOCG_01831 N 0.718
FGSG_05488 Fusarium graminearum FGSG_05488 N 0.718
Ppa-ncbp-2 Pristionchus pacificus PPA17381 N 0.718
e_gw1.80.70.1 Selaginella moellendorfii e_gw1.80.70.1 N 0.718
PDK_20s1327431g003 Phoenix dactylifera PDK_20s1327431g003 N 0.718
e_gw1.40.70.1 Melampsora laricis populina e_gw1.40.70.1 N 0.718
SB04G025800 Sorghum bicolor Sb04g025800 N 0.718
AFLA_046450 Aspergillus flavus CADAFLAG00005972 N 0.718
VDAG_05874 Verticillium dahliae VDAG_05874 N 0.718
VDBG_06810 Verticillium albo atrum VDBG_06810 N 0.718
gw1.12.351.1 Coccomyxa C 169 gw1.12.351.1 N 0.718
gw1.11.372.1 Chlorella vulgaris gw1.11.372.1 N 0.718
GRMZM2G034804 Zea mays GRMZM2G034804 N 0.718
estExt_fgenesh1_pm.C_20437 Schizophyllum commune estExt_fgenesh1_pm.C_20437 N 0.714
PredSwiss_CON682.3 Pneumocystis carinii PredSwiss_CON682.3 N 0.707
PredSwiss_ASS2010_2397.2 Pneumocystis carinii PredSwiss_ASS2010_2397.2 N 0.707
SPOG_01217 Schizosaccharomyces cryophilus SPOG_01217 N 0.704
PK11911.1 Cannabis sativa PK11911.1 N 0.704
Cucsa.174450 Cucumis sativus Cucsa.174450 N 0.704
LOC_Os02g39890 Oryza sativa LOC_Os02g39890 N 0.704
cassava43645.valid.m1 Manihot esculenta cassava43645.valid.m1 N 0.704
GSVIVG00020599001 Vitis vinifera GSVIVG00020599001 N 0.704
NCBP2L Equus caballus ENSECAG00000003478 N 0.704
BRADI3G48560 Brachypodium distachyon BRADI3G48560 N 0.704
cassava43646.valid.m1 Manihot esculenta cassava43646.valid.m1 N 0.704
Glyma12g33400.1 Glycine max Glyma12g33400.1 N 0.704
Minc06129 Meloidogyne incognita Minc06129 N 0.704
Minc02990 Meloidogyne incognita Minc02990 N 0.704
SJAG_01064 Schizosaccharomyces japonicus SJAG_01064 N 0.704
Glyma13g37030.1 Glycine max Glyma13g37030.1 N 0.704
CAOG_06930 Capsaspora owczarzaki CAOG_06930 N 0.704
estExt_fgenesh2_kg.C_20664 Agaricus bisporus estExt_fgenesh2_kg.C_20664 N 0.701