CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GSTUMT00008723001
(
Tuber melanosporum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
GSTUMT00008723001
T56949_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSTUMT00008723001
RRM
4
74
LFIGGLAWHTDDDALRQKFQEFGNVEEAVVVKDRDTGRSRGFGFVRYSSDEEATAAMDNMNDVEFDGRRIR
Links
Other
RRM
family RBPs
Other
Tuber melanosporum
RBPs
31 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RS2Z33
Arabidopsis thaliana
AT2G37340-TAIR-G
N
0.000
At-RS2Z
Arabidopsis thaliana
AT3G53500-TAIR-G
N
0.000
BGIOSIBCE017670
Oryza indica
BGIOSIBCE017670
N
0.000
XM_002877876.1
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5001437
N
0.000
Glyma03g33260.1
Glycine max
Glyma03g33260.1
N
0.000
Glyma19g35980.1
Glycine max
Glyma19g35980.1
N
0.000