Pc22g08880 (Penicillium chrysogenum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Pc22g08880 T58010_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Pc22g08880.t1 RRM 189 241
Pc22g08880.t1 RRM 280 338
Pc22g08880.t1 RRM 414 479
Pc22g08880.t1 RRM 505 568

Links

Other RRM family RBPs
Other Penicillium chrysogenum RBPs

49 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PMAA_071470 Penicillium marneffei PMAA_071470 N 0.918
estExt_fgenesh1_pg.C_260060 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_260060 N 0.885
e_gw1.17.287.1 Trichoderma reesei e_gw1.17.287.1 N 0.864
e_gw1.15.72.1 Trichoderma atroviride e_gw1.15.72.1 N 0.856
e_gw1.10.53.1 Trichoderma virens e_gw1.10.53.1 N 0.864
NCU06459 Neurospora crassa NCU06459 N 0.888
NFIA_082390 Neosartorya fischeri CADNFIAG00007689 N 0.934
ATEG_06757 Aspergillus terreus CADATEAG00009116 N 0.926
AO090001000681 Aspergillus oryzae CADAORAG00000620 N 0.930
ANIA_07480 Aspergillus nidulans CADANIAG00000573 N 0.922
An02g14100 Aspergillus niger CADANGAG00002937 N 0.918
estExt_fgenesh1_pg.C_sca_10_chr8_2_00298 Nectria haematococca estExt_fgenesh1_pg.C_sca_10_chr8_2_00298 N 0.872
estExt_fgenesh1_pm.C_60118 Neurospora tetrasperma estExt_fgenesh1_pm.C_60118 N 0.888
Pa_7_9880 Podospora anserina Pa_7_9880 N 0.868
GSTUMT00008077001 Tuber melanosporum GSTUMT00008077001 N 0.885
fgenesh1_pm.00082_#_76 Aspergillus carbonarius fgenesh1_pm.00082_#_76 N 0.926
estExt_fgenesh1_pm.C_10719 Cryphonectria parasitica estExt_fgenesh1_pm.C_10719 N 0.860
EAT78895.1 Phaeosphaeria nodorum EAT78895.1 N 0.902
fgenesh1_pg.4_#_772 Myceliophthora thermophila fgenesh1_pg.4_#_772 N 0.888
estExt_Genewise1Plus.C_chr_30420 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_30420 N 0.868
estExt_Genewise1.C_32212 Thielavia terrestris estExt_Genewise1.C_32212 N 0.869
estExt_Genewise1.C_240173 Cochliobolus heterostrophus C5 estExt_Genewise1.C_240173 N 0.893
estExt_fgenesh3_kg.C_190032 Neurospora discreta estExt_fgenesh3_kg.C_190032 N 0.884
AFUA_2G05670 Aspergillus fumigatus CADAFUAG00003365 N 0.938
AFLA_129820 Aspergillus flavus CADAFLAG00010040 N 0.934
ACLA_068670 Aspergillus clavatus CADACLAG00006690 N 0.926
MCYG_03534 Microsporum canis MCYG_03534 N 0.885
GLRG_03643 Colletotrichum graminicola GLRG_03643 N 0.860
FVEG_07083 Fusarium verticillioides FVEG_07083 N 0.876
FOXG_09455 Fusarium oxysporum FOXG_09455 N 0.876
FGSG_05444 Fusarium graminearum FGSG_05444 N 0.876
CPSG_07981 Coccidioides posadasii CPSG_07981 N 0.882
CIMG_00769 Coccidioides immitis CIMG_00769 N 0.885
CHGG_05709 Chaetomium globosum CHGG_05709 N 0.868
BDBG_09466 Blastomyces dermatitidis BDBG_09466 N 0.889
BC1G_14118 Botrytis cinerea BC1G_14118 N 0.901
MGG_08898 Magnaporthe oryzae MGG_08898 N 0.872
MGYG_03143 Microsporum gypseum MGYG_03143 N 0.881
VDBG_08703 Verticillium albo atrum VDBG_08703 N 0.851
VDAG_06364 Verticillium dahliae VDAG_06364 N 0.880
UREG_00743 Uncinocarpus reesii UREG_00743 N 0.885
TESG_05970 Trichophyton tonsurans TESG_05970 N 0.881
TERG_04964 Trichophyton rubrum TERG_04964 N 0.873
TEQG_01254 Trichophyton equinum TEQG_01254 N 0.881
SS1G_13716 Sclerotinia sclerotiorum SS1G_13716 N 0.897
SNOG_13871 Stagonospora nodorum SNOG_13871 N 0.902
PTRG_09392 Pyrenophora tritici repentis PTRG_09392 N 0.889
PABG_04754 Paracoccidioides brasiliensis PABG_04754 N 0.885
ARB_03865 Arthroderma benhamiae ARB_03865 N 0.881