ppa020841m (Prunus persica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ppa020841m T58496_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ppa020841m RRM 15 85
ppa020841m RRM 103 172
ppa020841m RRM 194 263
ppa020841m RRM 297 366

Links

Other RRM family RBPs
Other Prunus persica RBPs

9 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAI28969 Xenopus laevis AAI28969 N 0.000
rpb-7 Caenorhabditis elegans Y54E10BR.6 N 0.000
Ppa-rpb-7 Pristionchus pacificus PPA05219 N 0.000
polr2g Xenopus tropicalis ENSXETG00000006022 N 0.000
POLR2G Vicugna pacos ENSVPAG00000009534 N 0.000
POLR2G Tursiops truncatus ENSTTRG00000002478 N 0.000
POLR2G Takifugu rubripes ENSTRUG00000002492 N 0.000
Polr2g Rattus norvegicus ENSRNOG00000019439 N 0.000
POLR2G Pteropus vampyrus ENSPVAG00000003481 N 0.000
POLR2G Pan troglodytes ENSPTRG00000003786 N 0.000
ENSPPYG00000003147 Pongo pygmaeus ENSPPYG00000003147 N 0.000
POLR2G Procavia capensis ENSPCAG00000016408 N 0.000
POLR2G Oryzias latipes ENSORLG00000003154 N 0.000
SNAPOd2T00009931001 Oikopleura dioica SNAPOd2T00009931001 N 0.000
estExt_fgenesh1_pg.C_1060040 Nematostella vectensis estExt_fgenesh1_pg.C_1060040 N 0.000
XP_780458.1 Strongylocentrotus purpuratus XP_780458.1 N 0.000
XP_002157143.1 Hydra magnipapillata XP_002157143.1 N 0.000
XP_001176876.1 Strongylocentrotus purpuratus XP_001176876.1 N 0.000
XP_001175728.1 Strongylocentrotus purpuratus XP_001175728.1 N 0.000
XP_001175504.1 Strongylocentrotus purpuratus XP_001175504.1 N 0.000
Minc17095 Meloidogyne incognita Minc17095 N 0.000
Ame_R013924 Ailuropoda melanoleuca Ame_R013924 N 0.000
PASA_GEN_8000031 Daphnia pulex PASA_GEN_8000031 N 0.000
estExt_gwp.C_3050025 Branchiostoma floridae estExt_gwp.C_3050025 N 0.000
estExt_Genewise1Plus.C_sca_120103 Lottia gigantea estExt_Genewise1Plus.C_sca_120103 N 0.000
estExt_Genewise1Plus.C_2200037 Capitella teleta estExt_Genewise1Plus.C_2200037 N 0.000
estExt_fgenesh2_pg.C_1620033 Branchiostoma floridae estExt_fgenesh2_pg.C_1620033 N 0.000
POLR2G Oryctolagus cuniculus ENSOCUG00000009485 N 0.000
POLR2G Ornithorhynchus anatinus ENSOANG00000005808 N 0.000
ENSCSAVG00000002667 Ciona savignyi ENSCSAVG00000002667 N 0.000
POLR2G Cavia porcellus ENSCPOG00000001153 N 0.000
LOC100398629 Callithrix jacchus ENSCJAG00000018688 N 0.000
ENSCING00000004991 Ciona intestinalis ENSCING00000004991 N 0.000
POLR2G Canis familiaris ENSCAFG00000015461 N 0.000
RPB7_BOVIN Bos taurus ENSBTAG00000009483 N 0.000
POLR2G Anolis carolinensis ENSACAG00000001005 N 0.000
CRE30052 Caenorhabditis remanei CRE30052 N 0.000
CJA18930 Caenorhabditis japonica CJA18930 N 0.000
CBN18093 Caenorhabditis brenneri CBN18093 N 0.000
WUBG_12956 Wuchereria bancrofti WUBG_12956 N 0.000
LOAG_03448 Loa loa LOAG_03448 N 0.000
polr2gl Danio rerio ENSDARG00000056127 N 0.000
Polr2g Dipodomys ordii ENSDORG00000015696 N 0.000
Polr2g Mus musculus ENSMUSG00000071662 N 0.000
POLR2G Monodelphis domestica ENSMODG00000007984 N 0.000
POLR2G Macaca mulatta ENSMMUG00000014368 N 0.000
ENSMLUG00000011039 Myotis lucifugus ENSMLUG00000011039 N 0.000
ENSMLUG00000003971 Myotis lucifugus ENSMLUG00000003971 N 0.000
POLR2G Microcebus murinus ENSMICG00000009967 N 0.000
POLR2G Macropus eugenii ENSMEUG00000011547 N 0.000
POLR2G Loxodonta africana ENSLAFG00000004354 N 0.000
POLR2G Gorilla gorilla ENSGGOG00000011739 N 0.000
POLR2G Gasterosteus aculeatus ENSGACG00000017706 N 0.000
POLR2G Homo sapiens ENSG00000168002 N 0.000
LOC100063883 Equus caballus ENSECAG00000021465 N 0.000
Bm1_48540 Brugia malayi Bm1_48540 N 0.000