LOAG_03448 (Loa loa)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 LOAG_03448 T59931_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOAG_03448T0 S1 78 161

Links

Other S1 family RBPs
Other Loa loa RBPs

57 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Bm1_48540 Brugia malayi Bm1_48540 N 0.952
rpb-7 Caenorhabditis elegans Y54E10BR.6 N 0.845
CJA18930 Caenorhabditis japonica CJA18930 N 0.845
CBN18093 Caenorhabditis brenneri CBN18093 N 0.845
CBG04195 Caenorhabditis briggsae CBG04195 N 0.845
CRE30052 Caenorhabditis remanei CRE30052 N 0.833
XP_001175728.1 Strongylocentrotus purpuratus XP_001175728.1 N 0.821
XP_001175504.1 Strongylocentrotus purpuratus XP_001175504.1 N 0.821
XP_001176876.1 Strongylocentrotus purpuratus XP_001176876.1 N 0.821
WUBG_12956 Wuchereria bancrofti WUBG_12956 N 0.821
Minc17095 Meloidogyne incognita Minc17095 N 0.821
XP_780458.1 Strongylocentrotus purpuratus XP_780458.1 N 0.821
estExt_gwp.C_3050025 Branchiostoma floridae estExt_gwp.C_3050025 N 0.810
estExt_fgenesh2_pg.C_1620033 Branchiostoma floridae estExt_fgenesh2_pg.C_1620033 N 0.810
polr2g Xenopus tropicalis ENSXETG00000006022 N 0.786
POLR2G Anolis carolinensis ENSACAG00000001005 N 0.786
estExt_fgenesh1_pg.C_1060040 Nematostella vectensis estExt_fgenesh1_pg.C_1060040 N 0.786
AAI28969 Xenopus laevis AAI28969 N 0.786
polr2gl Danio rerio ENSDARG00000056127 N 0.786
PASA_GEN_8000031 Daphnia pulex PASA_GEN_8000031 N 0.786
Ppa-rpb-7 Pristionchus pacificus PPA05219 N 0.776
Polr2g Rattus norvegicus ENSRNOG00000019439 N 0.774
POLR2G Pan troglodytes ENSPTRG00000003786 N 0.774
POLR2G Takifugu rubripes ENSTRUG00000002492 N 0.774
Ame_R013924 Ailuropoda melanoleuca Ame_R013924 N 0.774
POLR2G Tursiops truncatus ENSTTRG00000002478 N 0.774
ENSPPYG00000003147 Pongo pygmaeus ENSPPYG00000003147 N 0.774
estExt_Genewise1Plus.C_sca_120103 Lottia gigantea estExt_Genewise1Plus.C_sca_120103 N 0.774
XP_002157143.1 Hydra magnipapillata XP_002157143.1 N 0.774
POLR2G Oryzias latipes ENSORLG00000003154 N 0.774
POLR2G Homo sapiens ENSG00000168002 N 0.774
LOC100063883 Equus caballus ENSECAG00000021465 N 0.774
POLR2G Gasterosteus aculeatus ENSGACG00000017706 N 0.774
POLR2G Gorilla gorilla ENSGGOG00000011739 N 0.774
POLR2G Loxodonta africana ENSLAFG00000004354 N 0.774
Polr2g Dipodomys ordii ENSDORG00000015696 N 0.774
POLR2G Cavia porcellus ENSCPOG00000001153 N 0.774
RPB7_BOVIN Bos taurus ENSBTAG00000009483 N 0.774
POLR2G Canis familiaris ENSCAFG00000015461 N 0.774
ENSCING00000004991 Ciona intestinalis ENSCING00000004991 N 0.774
LOC100398629 Callithrix jacchus ENSCJAG00000018688 N 0.774
POLR2G Procavia capensis ENSPCAG00000016408 N 0.774
POLR2G Macropus eugenii ENSMEUG00000011547 N 0.774
Polr2g Mus musculus ENSMUSG00000071662 N 0.774
POLR2G Ornithorhynchus anatinus ENSOANG00000005808 N 0.774
POLR2G Oryctolagus cuniculus ENSOCUG00000009485 N 0.774
POLR2G Monodelphis domestica ENSMODG00000007984 N 0.774
POLR2G Macaca mulatta ENSMMUG00000014368 N 0.774
ENSMLUG00000003971 Myotis lucifugus ENSMLUG00000003971 N 0.774
ENSMLUG00000011039 Myotis lucifugus ENSMLUG00000011039 N 0.774
POLR2G Pteropus vampyrus ENSPVAG00000003481 N 0.762
POLR2G Microcebus murinus ENSMICG00000009967 N 0.762
ENSCSAVG00000002667 Ciona savignyi ENSCSAVG00000002667 N 0.738
POLR2G Vicugna pacos ENSVPAG00000009534 N 0.738
estExt_Genewise1Plus.C_2200037 Capitella teleta estExt_Genewise1Plus.C_2200037 N 0.738
PHUM079870 Pediculus humanus PHUM079870 N 0.714
SNAPOd2T00009931001 Oikopleura dioica SNAPOd2T00009931001 N 0.702