CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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EIF2S1
(
Canis familiaris
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
ENSCAFG00000016386
T60272_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
eIF-2alpha
M231_0.6
Drosophila melanogaster
WGCAUG
RNAcompete
Ray et al.(2013)
RNCMPT00273
0.895
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCAFP00000024116
S1
14
88
PEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECVVVIRVDKEKGYIDLSKR
ENSCAFP00000034264
S1
14
88
PEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECVVVIRVDKEKGYIDLSKR
Links
Other
S1
family RBPs
Other
Canis familiaris
RBPs
271 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
qkr58E-3
Drosophila melanogaster
FBgn0022984
N
0.000
GM15930
Drosophila sechellia
FBgn0170846
N
0.000
GM23284
Drosophila sechellia
FBgn0178151
N
0.000
GM23298
Drosophila sechellia
FBgn0178165
N
0.000
GD11626
Drosophila simulans
FBgn0183366
N
0.000
GD11683
Drosophila simulans
FBgn0183423
N
0.000
GD21670
Drosophila simulans
FBgn0193093
N
0.000
GD25131
Drosophila simulans
FBgn0196443
N
0.000
GJ19943
Drosophila virilis
FBgn0207085
N
0.000
GM15922
Drosophila sechellia
FBgn0170838
N
0.000
GM15865
Drosophila sechellia
FBgn0170781
N
0.000
GM15642
Drosophila sechellia
FBgn0170560
N
0.000
CG4021
Drosophila melanogaster
FBgn0034659
N
0.000
CG3927
Drosophila melanogaster
FBgn0034739
N
0.000
CG3875
Drosophila melanogaster
FBgn0034740
N
0.000
GA17537-RA
Drosophila pseudoobscura
FBgn0077548
N
0.000
GF13022
Drosophila ananassae
FBgn0090055
N
0.000
GG20697
Drosophila erecta
FBgn0112884
N
0.000
GH20535
Drosophila grimshawi
FBgn0127998
N
0.000
GI18981
Drosophila mojavensis
FBgn0141720
N
0.000
GK20825
Drosophila willistoni
FBgn0222821
N
0.000