CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
GJ23373
(
Drosophila virilis
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
FBgn0210474
T60655_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0237790
S1
78
159
RPFKGEVLDAVVKQINKVGMFAEIGPLSCFISHHSIPADMQFCPNGNPPCYKSKDEDVVISGEDKIRLKIVGTRVDATGIFA
Links
Other
S1
family RBPs
Other
Drosophila virilis
RBPs
65 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
13113.t00006
Oryza sativa
13113.t00006
N
0.000
LOC_Os09g05120
Oryza sativa
LOC_Os09g05120
N
0.000
LOC_Os09g06290
Oryza sativa
LOC_Os09g06290
N
0.000
LOC_Os09g06410
Oryza sativa
LOC_Os09g06410
N
0.000
LOC_Os09g26090
Oryza sativa
LOC_Os09g26090
N
0.000
LOC_Os10g17724
Oryza sativa
LOC_Os10g17724
N
0.000
LOC_Os11g09950
Oryza sativa
LOC_Os11g09950
N
0.000
LOC_Os11g11800
Oryza sativa
LOC_Os11g11800
N
0.000
LOC_Os11g15140
Oryza sativa
LOC_Os11g15140
N
0.000
LOC_Os11g26000
Oryza sativa
LOC_Os11g26000
N
0.000
LOC_Os12g08410
Oryza sativa
LOC_Os12g08410
N
0.000
LOC_Os12g24920
Oryza sativa
LOC_Os12g24920
N
0.000
LOC_Os12g30850
Oryza sativa
LOC_Os12g30850
N
0.000
LOC_Os12g33520
Oryza sativa
LOC_Os12g33520
N
0.000
LOC_Os07g15070
Oryza sativa
LOC_Os07g15070
N
0.000
LOC_Os06g51540
Oryza sativa
LOC_Os06g51540
N
0.000
LOC_Os02g17800
Oryza sativa
LOC_Os02g17800
N
0.000
LOC_Os02g22180
Oryza sativa
LOC_Os02g22180
N
0.000
LOC_Os02g24230
Oryza sativa
LOC_Os02g24230
N
0.000
LOC_Os02g25670
Oryza sativa
LOC_Os02g25670
N
0.000
LOC_Os04g07550
Oryza sativa
LOC_Os04g07550
N
0.000
LOC_Os04g13790
Oryza sativa
LOC_Os04g13790
N
0.000
LOC_Os04g16890
Oryza sativa
LOC_Os04g16890
N
0.000
LOC_Os04g18470
Oryza sativa
LOC_Os04g18470
N
0.000
LOC_Os04g23950
Oryza sativa
LOC_Os04g23950
N
0.000
LOC_Os05g24420
Oryza sativa
LOC_Os05g24420
N
0.000
LOC_Os05g28250
Oryza sativa
LOC_Os05g28250
N
0.000
LOC_Os06g28850
Oryza sativa
LOC_Os06g28850
N
0.000
LOC_Os06g34310
Oryza sativa
LOC_Os06g34310
N
0.000
LOC_Os12g33640
Oryza sativa
LOC_Os12g33640
N
0.000