VDBG_09415 (Verticillium albo atrum)
CCHC ZF,KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00013 (KH_1) 		IPR001878
IPR018111 		VDBG_09415 T06966_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
VDBG_09415T0 KH 182 265
VDBG_09415T0 CCHC ZF 303 320
VDBG_09415T0 CCHC ZF 328 345

Links

Other CCHC ZF,KH family RBPs
Other Verticillium albo atrum RBPs

44 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB04099.1 Alternaria brassicicola AB04099.1 N 0.950
ACLA_038770 Aspergillus clavatus CADACLAG00003525 N 0.975
AFLA_031810 Aspergillus flavus CADAFLAG00002556 N 0.975
AFUA_3G10840 Aspergillus fumigatus CADAFUAG00005564 N 0.975
An02g06570 Aspergillus niger CADANGAG00002175 N 0.975
ANIA_10615 Aspergillus nidulans CADANIAG00005496 N 0.975
BC1G_07392 Botrytis cinerea BC1G_07392 N 0.950
BDBG_03134 Blastomyces dermatitidis BDBG_03134 N 0.975
bpb1 Schizosaccharomyces pombe SPCC962.06c N 0.750
CHGG_07335 Chaetomium globosum CHGG_07335 N 0.983
CIMG_03768 Coccidioides immitis CIMG_03768 N 0.975
CPSG_03514 Coccidioides posadasii CPSG_03514 N 0.975
EAT80773.2 Phaeosphaeria nodorum EAT80773.2 N 0.958
estExt_fgenesh1_pm.C_10341 Neurospora tetrasperma estExt_fgenesh1_pm.C_10341 N 0.992
estExt_fgenesh1_pm.C_50279 Schizophyllum commune estExt_fgenesh1_pm.C_50279 N 0.708
estExt_Genewise1.C_12313 Neurospora discreta estExt_Genewise1.C_12313 N 0.750
estExt_Genewise1.C_12889 Cryphonectria parasitica estExt_Genewise1.C_12889 N 0.983
estExt_Genewise1Plus.C_22270 Thielavia terrestris estExt_Genewise1Plus.C_22270 N 0.983
estExt_Genewise1Plus.C_chr_50382 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_50382 N 0.933
e_gw1.6.74.1 Phycomyces blakesleeanus e_gw1.6.74.1 N 0.725
FGSG_02080 Fusarium graminearum FGSG_02080 N 0.950
FVEG_07538 Fusarium verticillioides FVEG_07538 N 0.842
GLRG_01222 Colletotrichum graminicola GLRG_01222 N 0.975
GSTUMT00005703001 Tuber melanosporum GSTUMT00005703001 N 0.975
MCYG_00821 Microsporum canis MCYG_00821 N 0.967
MGG_06748 Magnaporthe oryzae MGG_06748 N 0.967
MGYG_01149 Microsporum gypseum MGYG_01149 N 0.958
NCU04110 Neurospora crassa NCU04110 N 0.992
NFIA_066410 Neosartorya fischeri CADNFIAG00006460 N 0.975
PABG_02328 Paracoccidioides brasiliensis PABG_02328 N 0.842
Pa_2_3850 Podospora anserina Pa_2_3850 N 0.992
Pc18g00800 Penicillium chrysogenum Pc18g00800 N 0.975
PMAA_023720 Penicillium marneffei PMAA_023720 N 0.958
PredSwiss_EST660.1 Pneumocystis carinii PredSwiss_EST660.1 N 0.792
PTRG_00022 Pyrenophora tritici repentis PTRG_00022 N 0.942
SJAG_00249 Schizosaccharomyces japonicus SJAG_00249 N 0.808
SNOG_11729 Stagonospora nodorum SNOG_11729 N 0.875
SOCG_03845 Schizosaccharomyces octosporus SOCG_03845 N 0.750
SPOG_03392 Schizosaccharomyces cryophilus SPOG_03392 N 0.750
SS1G_07196 Sclerotinia sclerotiorum SS1G_07196 N 0.950
TEQG_01541 Trichophyton equinum TEQG_01541 N 0.825
TERG_00369 Trichophyton rubrum TERG_00369 N 0.958
TESG_02440 Trichophyton tonsurans TESG_02440 N 0.825
VDAG_04652 Verticillium dahliae VDAG_04652 N 1.000