Zcchc13 (Mus musculus)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 ENSMUSG00000031330 T10327_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000033692 CCHC ZF 4 21
ENSMUSP00000033692 CCHC ZF 45 61
ENSMUSP00000033692 CCHC ZF 65 82
ENSMUSP00000033692 CCHC ZF 89 105
ENSMUSP00000033692 CCHC ZF 110 127
ENSMUSP00000033692 CCHC ZF 128 145
ENSMUSP00000033692 CCHC ZF 149 166

Links

Other CCHC ZF family RBPs
Other Mus musculus RBPs

42 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29889.m003354 Ricinus communis 29889.m003354 N 0.000
A9PE95_POPTR Populus trichocarpa POPTR_0008s10050 N 0.000
B9HX66_POPTR Populus trichocarpa POPTR_0010s16010 N 0.000
BGIOSIBCE010878 Oryza indica BGIOSIBCE010878 N 0.000
BRADI1G64130 Brachypodium distachyon BRADI1G64130 N 0.000
cassava42994.valid.m1 Manihot esculenta cassava42994.valid.m1 N 0.000
Cucsa.252380 Cucumis sativus Cucsa.252380 N 0.000
Glyma09g03660.1 Glycine max Glyma09g03660.1 N 0.000
Glyma15g14550.1 Glycine max Glyma15g14550.1 N 0.000
Glyma17g04190.1 Glycine max Glyma17g04190.1 N 0.000
GSVIVG00034940001 Vitis vinifera GSVIVG00034940001 N 0.000
LOC_Os03g20100 Oryza sativa LOC_Os03g20100 N 0.000
MDP0000158987 Malus x domestica MDP0000158987 N 0.000
Medtr2g037310 Medicago truncatula Medtr2g037310 N 0.000
mgf005405m Mimulus guttatus mgf005405m N 0.000
mgf010973m Mimulus guttatus mgf010973m N 0.000
PK19934.1 Cannabis sativa PK19934.1 N 0.000
ppa006438m Prunus persica ppa006438m N 0.000
RPS1 Arabidopsis thaliana AT5G30510-TAIR-G N 0.000
SB01G037100 Sorghum bicolor Sb01g037100 N 0.000
XM_002874427.1 Arabidopsis lyrata fgenesh2_kg.6__2815__AT5G30510.1 N 0.000