ENSEEUG00000007494 (Erinaceus europaeus)
CSD

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00313 (CSD) IPR002059 ENSEEUG00000007494 T16835_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
YB-1
M111_0.6 		Homo sapiens AACAUCD RNAcompete
Ray et al.(2013)
RNCMPT00116 		0.917
YB-1
M081_0.6 		Homo sapiens AACAUC RNAcompete
Ray et al.(2013)
RNCMPT00083 		0.917
ybx2-a
M260_0.6 		Xenopus laevis GCCANACCAYCGC SELEX
Cook et al.(2011)
130_11376140 		0.901
ybx2-a
M254_0.6 		Xenopus laevis KAACAUCU SELEX
Cook et al.(2011)
115_7499328 		0.901
ybx2-a
M250_0.6 		Xenopus laevis UAACAUC SELEX
Cook et al.(2011)
114_7499328 		0.901
YBX2
M082_0.6 		Homo sapiens AACAWCD RNAcompete
Ray et al.(2013)
RNCMPT00084 		0.901
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSEEUP00000006823 CSD 84 154

Links

Other CSD family RBPs
Other Erinaceus europaeus RBPs

186 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL007436 Aedes aegypti AAEL007436 N 0.000
AAEL007449 Aedes aegypti AAEL007449 N 0.000
AAEL801228 Aedes aegypti AAEL007447 N 0.000
AGAP007802 Anopheles gambiae AGAP007802 N 0.000
AGAP007803 Anopheles gambiae AGAP007803 N 0.000
amel4_ncbi_hmm5263 Apis mellifera amel4_ncbi_hmm5263 N 0.000
CPIJ010645 Culex quinquefasciatus CPIJ010645 N 0.000
CpipJ_CPIJ010645 Culex pipiens CpipJ_CPIJ010645 N 0.000
CpipJ_CPIJ011735 Culex pipiens CpipJ_CPIJ011735 N 0.000
DGIL_AUG5s11561g1t1 Acyrtosiphon pisum DGIL_AUG5s11561g1t1 N 0.000
GA16600-RA Drosophila pseudoobscura FBgn0076615 N 0.000
GD24374 Drosophila simulans FBgn0195715 N 0.000
GE14506 Drosophila yakuba FBgn0232110 N 0.000
GF19039 Drosophila ananassae FBgn0096051 N 0.000
GG16439 Drosophila erecta FBgn0108670 N 0.000
GH23931 Drosophila grimshawi FBgn0131388 N 0.000
GJ14351 Drosophila virilis FBgn0201564 N 0.000
GK13697 Drosophila willistoni FBgn0215705 N 0.000
GL18179 Drosophila persimilis FBgn0155782 N 0.000
GM26772 Drosophila sechellia FBgn0181625 N 0.000
gw Drosophila melanogaster FBgn0051992 N 0.000