BGIOSIBCE008472 (Oryza indica)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 BGIOSIBCE008472 T18125_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BGIOSIBCE008472 KH 138 202

Links

Other KH family RBPs
Other Oryza indica RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
28128.m000156 Ricinus communis 28128.m000156 N 0.711
AT4G26480 Arabidopsis thaliana AT4G26480-TAIR-G N 0.800
AT5G56140 Arabidopsis thaliana AT5G56140-TAIR-G N 0.815
BGIOSIBCE019075 Oryza indica BGIOSIBCE019075 N 0.738
BRADI3G22307 Brachypodium distachyon BRADI3G22307 N 0.708
BRADI3G56540 Brachypodium distachyon BRADI3G56540 N 0.924
cassava30587.valid.m1 Manihot esculenta cassava30587.valid.m1 N 0.821
cassava410.valid.m1 Manihot esculenta cassava410.valid.m1 N 0.769
cassava411.valid.m1 Manihot esculenta cassava411.valid.m1 N 0.769
cassava412.valid.m1 Manihot esculenta cassava412.valid.m1 N 0.769
chr3.CM0047.410.nc Lotus japonicus chr3.CM0047.410.nc N 0.815
Cucsa.334300 Cucumis sativus Cucsa.334300 N 0.831
estExt_fgenesh1_pm.C_2690009 Physcomitrella patens estExt_fgenesh1_pm.C_2690009 N 0.723
estExt_Genewise1.C_2260018 Physcomitrella patens estExt_Genewise1.C_2260018 N 0.769
estExt_gwp_gw1.C_680211 Physcomitrella patens estExt_gwp_gw1.C_680211 N 0.707
Glyma04g12370.1 Glycine max Glyma04g12370.1 N 0.851
Glyma06g48070.1 Glycine max Glyma06g48070.1 N 0.864
GRMZM2G029029 Zea mays GRMZM2G029029 N 0.969
GRMZM2G092182 Zea mays GRMZM2G092182 N 0.924
GRMZM2G125531 Zea mays GRMZM2G125531 N 0.723
GSVIVG00014762001 Vitis vinifera GSVIVG00014762001 N 0.809
LOC_Os02g49080 Oryza sativa LOC_Os02g49080 N 1.000
LOC_Os05g34670 Oryza sativa LOC_Os05g34670 N 0.738
MDP0000306088 Malus x domestica MDP0000306088 N 0.862
Medtr3g016780 Medicago truncatula Medtr3g016780 N 0.800
mgf006761m Mimulus guttatus mgf006761m N 0.800
PK16956.1 Cannabis sativa PK16956.1 N 0.836
ppa009341m Prunus persica ppa009341m N 0.851
SB04G029520 Sorghum bicolor Sb04g029520 N 0.954
XM_002864390.1 Arabidopsis lyrata fgenesh2_kg.8__1516__AT5G56140.1 N 0.815
XM_002867517.1 Arabidopsis lyrata fgenesh2_kg.7__1597__AT4G26480.1 N 0.800