ppa009341m (Prunus persica)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ppa009341m T21976_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ppa009341m KH 148 214

Links

Other KH family RBPs
Other Prunus persica RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK16956.1 Cannabis sativa PK16956.1 N 0.955
Glyma04g12370.1 Glycine max Glyma04g12370.1 N 0.925
MDP0000306088 Malus x domestica MDP0000306088 N 0.925
BRADI3G56540 Brachypodium distachyon BRADI3G56540 N 0.925
GSVIVG00014762001 Vitis vinifera GSVIVG00014762001 N 0.912
cassava30587.valid.m1 Manihot esculenta cassava30587.valid.m1 N 0.910
Glyma06g48070.1 Glycine max Glyma06g48070.1 N 0.910
GRMZM2G092182 Zea mays GRMZM2G092182 N 0.866
SB04G029520 Sorghum bicolor Sb04g029520 N 0.866
Cucsa.334300 Cucumis sativus Cucsa.334300 N 0.866
XM_002867517.1 Arabidopsis lyrata fgenesh2_kg.7__1597__AT4G26480.1 N 0.851
GRMZM2G029029 Zea mays GRMZM2G029029 N 0.851
BGIOSIBCE008472 Oryza indica BGIOSIBCE008472 N 0.851
mgf006761m Mimulus guttatus mgf006761m N 0.851
LOC_Os02g49080 Oryza sativa LOC_Os02g49080 N 0.851
Medtr3g016780 Medicago truncatula Medtr3g016780 N 0.836
cassava412.valid.m1 Manihot esculenta cassava412.valid.m1 N 0.836
cassava411.valid.m1 Manihot esculenta cassava411.valid.m1 N 0.836
cassava410.valid.m1 Manihot esculenta cassava410.valid.m1 N 0.836
AT5G56140 Arabidopsis thaliana AT5G56140-TAIR-G N 0.836
XM_002864390.1 Arabidopsis lyrata fgenesh2_kg.8__1516__AT5G56140.1 N 0.836
AT4G26480 Arabidopsis thaliana AT4G26480-TAIR-G N 0.821
28128.m000156 Ricinus communis 28128.m000156 N 0.803
chr3.CM0047.410.nc Lotus japonicus chr3.CM0047.410.nc N 0.791
LOC_Os05g34670 Oryza sativa LOC_Os05g34670 N 0.761
BGIOSIBCE019075 Oryza indica BGIOSIBCE019075 N 0.761
POPTR_0001s47500 Populus trichocarpa POPTR_0001s47500 N 0.753
A9PGC0_POPTR Populus trichocarpa POPTR_0011s17110 N 0.753
estExt_Genewise1.C_2260018 Physcomitrella patens estExt_Genewise1.C_2260018 N 0.746
estExt_gwp_gw1.C_680211 Physcomitrella patens estExt_gwp_gw1.C_680211 N 0.733
GRMZM2G125531 Zea mays GRMZM2G125531 N 0.731
cassava13904.valid.m1 Manihot esculenta cassava13904.valid.m1 N 0.731
LjSGA_139736.1.1 Lotus japonicus LjSGA_139736.1.1 N 0.720
PDK_20s1419021g001 Phoenix dactylifera PDK_20s1419021g001 N 0.716
chr6.LjT09E22.140.nd Lotus japonicus chr6.LjT09E22.140.nd N 0.708