CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CPIJ015853
(
Culex quinquefasciatus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
CPIJ015853
T18335_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPIJ015853-PA
KH
131
180
LSRAIGRLAGKGGRTKFTLENSTKTRIVLQDSKIHILGNYKNIQYAKRAI
Links
Other
KH
family RBPs
Other
Culex quinquefasciatus
RBPs
86 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAEL011832
Aedes aegypti
AAEL011832
N
0.940
AAH42279
Xenopus laevis
AAH42279
N
0.740
AAQ24169
Xenopus laevis
AAQ24169
N
0.740
AGAP004145
Anopheles gambiae
AGAP004145
N
0.820
amel4_ncbi_hmm14037
Apis mellifera
amel4_ncbi_hmm14037
N
0.820
Ame_R013855
Ailuropoda melanoleuca
Ame_R013855
N
0.700
BGIBMGA014064
Bombyx mori
BGIBMGA014064
N
0.820
Bm1_42995
Brugia malayi
Bm1_42995
N
0.740
CPIJ019677
Culex quinquefasciatus
CPIJ019677
N
1.000
CpipJ_CPIJ015853
Culex pipiens
CpipJ_CPIJ015853
N
1.000
CpipJ_CPIJ019677
Culex pipiens
CpipJ_CPIJ019677
N
1.000
DGIL_AUG5s4501g8t1
Acyrtosiphon pisum
DGIL_AUG5s4501g8t1
N
0.820
EFA79428.1
Polysphondylium pallidum
EFA79428.1
N
0.720
ENSCING00000009577
Ciona intestinalis
ENSCING00000009577
N
0.740
ENSCJAG00000022611
Callithrix jacchus
ENSCJAG00000022611
N
0.700
ENSCSAVG00000001303
Ciona savignyi
ENSCSAVG00000001303
N
0.740
ENSOCUG00000006100
Oryctolagus cuniculus
ENSOCUG00000006100
N
0.700
ENSOCUG00000022236
Oryctolagus cuniculus
ENSOCUG00000022236
N
0.700
ENSPPYG00000012353
Pongo pygmaeus
ENSPPYG00000012353
N
0.700
estExt_fgenesh1_pg.C_110137
Monosiga brevicollis
estExt_fgenesh1_pg.C_110137
N
0.720
fgenesh1_pg.C_scaffold_107000027
Daphnia pulex
fgenesh1_pg.C_scaffold_107000027
N
0.840
fgenesh1_pg.scaffold_18000119
Nematostella vectensis
fgenesh1_pg.scaffold_18000119
N
0.720
fgenesh2_pg.scaffold_196000015
Branchiostoma floridae
fgenesh2_pg.scaffold_196000015
N
0.720
fgenesh2_pm.scaffold_78000001
Branchiostoma floridae
fgenesh2_pm.scaffold_78000001
N
0.720
fgeneshCV_pg.C_scaffold_11000142
Chlorella vulgaris
fgeneshCV_pg.C_scaffold_11000142
N
0.720
fgeneshTA2_pg.C_scaffold_14000176
Trichoplax adhaerens
fgeneshTA2_pg.C_scaffold_14000176
N
0.760
GA11169-RA
Drosophila pseudoobscura
FBgn0071224
N
0.824
GD17488
Drosophila simulans
FBgn0189040
N
0.804
GE17874
Drosophila yakuba
FBgn0068478
N
0.804
Genemark1.5719_g
Coccomyxa C 169
Genemark1.5719_g
N
0.720
GF20246
Drosophila ananassae
FBgn0097253
N
0.804
GG19285
Drosophila erecta
FBgn0111489
N
0.804
GH12628
Drosophila grimshawi
FBgn0120107
N
0.824
GI11042
Drosophila mojavensis
FBgn0133805
N
0.843
GID1.0042265
Dictyostelium purpureum
GID1.0042265
N
0.720
GJ15820
Drosophila virilis
FBgn0203007
N
0.824
GK20148
Drosophila willistoni
FBgn0222145
N
0.804
GM23025
Drosophila sechellia
FBgn0177893
N
0.804
l(1)G0004
Drosophila melanogaster
FBgn0027334
N
0.804
LOAG_05624
Loa loa
LOAG_05624
N
0.740
LOC100061904
Equus caballus
ENSECAG00000011263
N
0.700
LOC100389955
Callithrix jacchus
ENSCJAG00000006564
N
0.700
nasonia_NCBI_hmm120183
Nasonia vitripennis
nasonia_NCBI_hmm120183
N
0.800
PHUM356890
Pediculus humanus
PHUM356890
N
0.800
pno1
Dictyostelium discoideum
DDB_G0287557
N
0.720
PNO1
Microcebus murinus
ENSMICG00000010897
N
0.700
PNO1
Meleagris gallopavo
ENSMGAG00000004514
N
0.740
PNO1
Macropus eugenii
ENSMEUG00000004504
N
0.700
PNO1
Loxodonta africana
ENSLAFG00000000046
N
0.700
PNO1
Gorilla gorilla
ENSGGOG00000009158
N
0.700
PNO1
Gasterosteus aculeatus
ENSGACG00000012047
N
0.700
PNO1
Homo sapiens
ENSG00000115946
N
0.700
PNO1
Erinaceus europaeus
ENSEEUG00000009611
N
0.700
Pno1
Dipodomys ordii
ENSDORG00000006867
N
0.700
pno1
Danio rerio
ENSDARG00000008502
N
0.740
PNO1
Cavia porcellus
ENSCPOG00000010130
N
0.700
PNO1
Canis familiaris
ENSCAFG00000003256
N
0.700
PNO1
Pan troglodytes
ENSPTRG00000011999
N
0.700
PNO1
Anolis carolinensis
ENSACAG00000001218
N
0.720
PNO1
Myotis lucifugus
ENSMLUG00000010850
N
0.700
PNO1
Tetraodon nigroviridis
ENSTNIG00000009825
N
0.720
PNO1
Pteropus vampyrus
ENSPVAG00000012695
N
0.700
Pno1
Rattus norvegicus
ENSRNOG00000005524
N
0.700
PNO1
Sus scrofa
ENSSSCG00000008352
N
0.700
PNO1
Taeniopygia guttata
ENSTGUG00000002369
N
0.720
PNO1
Takifugu rubripes
ENSTRUG00000012470
N
0.720
PNO1
Tursiops truncatus
ENSTTRG00000014002
N
0.700
PNO1
Vicugna pacos
ENSVPAG00000012083
N
0.700
pno1
Xenopus tropicalis
ENSXETG00000017349
N
0.740
PNO1
Procavia capensis
ENSPCAG00000016146
N
0.700
PNO1
Monodelphis domestica
ENSMODG00000003567
N
0.700
PNO1
Ornithorhynchus anatinus
ENSOANG00000008388
N
0.700
PNO1
Ochotona princeps
ENSOPRG00000009643
N
0.700
PNO1_BOVIN
Bos taurus
ENSBTAG00000010604
N
0.700
PNO1_CHICK
Gallus gallus
ENSGALG00000009093
N
0.740
PNO1_IXOSC
Ixodes scapularis
ISCW023560
N
0.720
Q6VBQ6_ORYLA
Oryzias latipes
ENSORLG00000002371
N
0.740
Q7YRC8_MACMU
Macaca mulatta
ENSMMUG00000017461
N
0.700
Q8AVH4
Xenopus laevis
Q8AVH4
N
0.740
WUBG_12774
Wuchereria bancrofti
WUBG_12774
N
0.740
XM_001095777.1
Macaca mulatta
ENSMMUG00000030357
N
0.700
XP_001202155.1
Strongylocentrotus purpuratus
XP_001202155.1
N
0.740
XP_001202160.1
Strongylocentrotus purpuratus
XP_001202160.1
N
0.740
XP_002162789.1
Hydra magnipapillata
XP_002162789.1
N
0.760
XP_791733.2
Strongylocentrotus purpuratus
XP_791733.2
N
0.740
XP_798188.2
Strongylocentrotus purpuratus
XP_798188.2
N
0.740