CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Q6J4Q8_9PRIM
(
Gorilla gorilla
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSGGOG00000000940
T18886_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
KHDRBS3
M033_0.6
Homo sapiens
AUAAAV
RNAcompete
Ray et al.(2013)
RNCMPT00034
1.000
KHDRBS2
M176_0.6
Homo sapiens
RAUAAAM
RNAcompete
Ray et al.(2013)
RNCMPT00185
0.857
KHDRBS1
M160_0.6
Homo sapiens
AUAAAAV
RNAcompete
Ray et al.(2013)
RNCMPT00169
0.753
Khdrbs1
M060_0.6
Mus musculus
UAAAAVV
RNAcompete
Ray et al.(2013)
RNCMPT00062
0.753
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000000925
KH
58
140
QKVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLNDDLHVLIEVFAPPAEA
Links
Other
KH
family RBPs
Other
Gorilla gorilla
RBPs
102 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R015338
Ailuropoda melanoleuca
Ame_R015338
N
0.000
ENSCPOG00000024507
Cavia porcellus
ENSCPOG00000024507
N
0.000
LOC100057436
Equus caballus
ENSECAG00000018566
N
0.000
Tmem6
Rattus norvegicus
ENSRNOG00000003310
N
0.000
Tmem63a
Mus musculus
ENSMUSG00000026519
N
0.000
TMEM63A
Oryctolagus cuniculus
ENSOCUG00000001907
N
0.000
TMEM63A
Otolemur garnettii
ENSOGAG00000010346
N
0.000
TMEM63A
Ochotona princeps
ENSOPRG00000012151
N
0.000
TMEM63A
Pteropus vampyrus
ENSPVAG00000004786
N
0.000
TMEM63A
Sus scrofa
ENSSSCG00000010854
N
0.000
TMEM63A
Tursiops truncatus
ENSTTRG00000010132
N
0.000
TMEM63A
Monodelphis domestica
ENSMODG00000005934
N
0.000
TMEM63A
Myotis lucifugus
ENSMLUG00000016338
N
0.000
TMEM63A
Microcebus murinus
ENSMICG00000004058
N
0.000
TMEM63A
Dasypus novemcinctus
ENSDNOG00000024203
N
0.000
Tmem63a
Dipodomys ordii
ENSDORG00000003334
N
0.000
TMEM63A
Echinops telfairi
ENSETEG00000012297
N
0.000
TMEM63A
Felis catus
ENSFCAG00000006966
N
0.000
TMEM63A
Callithrix jacchus
ENSCJAG00000012604
N
0.000
TMEM63A
Homo sapiens
ENSG00000196187
N
0.000
TMEM63A
Gorilla gorilla
ENSGGOG00000000862
N
0.000
TMEM63A
Loxodonta africana
ENSLAFG00000017739
N
0.000
TMEM63A
Macropus eugenii
ENSMEUG00000003227
N
0.000
XR_022984.1
Pan troglodytes
ENSPTRG00000002040
N
0.000