e_gw1.23.297.1 (Selaginella moellendorfii)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 e_gw1.23.297.1 T20756_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.23.297.1 KH 112 168

Links

Other KH family RBPs
Other Selaginella moellendorfii RBPs

25 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT1G09660 Arabidopsis thaliana AT1G09660-TAIR-G N 0.717
AT4G26480 Arabidopsis thaliana AT4G26480-TAIR-G N 0.733
AT5G56140 Arabidopsis thaliana AT5G56140-TAIR-G N 0.726
BGIOSIBCE004530 Oryza indica BGIOSIBCE004530 N 0.717
BRADI2G57220 Brachypodium distachyon BRADI2G57220 N 0.738
cassava13306.valid.m1 Manihot esculenta cassava13306.valid.m1 N 0.719
cassava13307.valid.m1 Manihot esculenta cassava13307.valid.m1 N 0.719
cassava410.valid.m1 Manihot esculenta cassava410.valid.m1 N 0.717
cassava411.valid.m1 Manihot esculenta cassava411.valid.m1 N 0.717
cassava412.valid.m1 Manihot esculenta cassava412.valid.m1 N 0.717
chr3.CM0047.410.nc Lotus japonicus chr3.CM0047.410.nc N 0.721
Cucsa.114230 Cucumis sativus Cucsa.114230 N 0.712
estExt_fgenesh1_pm.C_2690009 Physcomitrella patens estExt_fgenesh1_pm.C_2690009 N 0.814
estExt_Genewise1.C_2260018 Physcomitrella patens estExt_Genewise1.C_2260018 N 0.754
e_gw1.35.311.1 Selaginella moellendorfii e_gw1.35.311.1 N 0.767
GRMZM2G092182 Zea mays GRMZM2G092182 N 0.705
GSVIVG00023231001 Vitis vinifera GSVIVG00023231001 N 0.738
LOC_Os01g66300 Oryza sativa LOC_Os01g66300 N 0.717
MDP0000306088 Malus x domestica MDP0000306088 N 0.714
Medtr2g005410 Medicago truncatula Medtr2g005410 N 0.763
Medtr3g016780 Medicago truncatula Medtr3g016780 N 0.721
SB03G042090 Sorghum bicolor Sb03g042090 N 0.729
XM_002864390.1 Arabidopsis lyrata fgenesh2_kg.8__1516__AT5G56140.1 N 0.726
XM_002867517.1 Arabidopsis lyrata fgenesh2_kg.7__1597__AT4G26480.1 N 0.738
XM_002892469.1 Arabidopsis lyrata fgenesh2_kg.1__1021__AT1G09660.1 N 0.717