ZRAB2_CHICK (Gallus gallus)
RanBP ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP) IPR001876 ENSGALG00000011340 T26500_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ZRANB2
M259_0.6 		Homo sapiens Sequence logo not available AGGUAA(N)(1-2)AGGUAA SELEX
Cook et al.(2011)
1285_19304800 		0.983
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000018494 RanBP ZF 9 38
ENSGALP00000018494 RanBP ZF 65 94

Links

Other RanBP ZF family RBPs
Other Gallus gallus RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
125254 Helobdella robusta 125254 I 0.721
A7YWH2_BOVIN Bos taurus ENSBTAG00000002627 I 0.983
AAH84309 Xenopus laevis AAH84309 I 1.000
AAI33785 Xenopus laevis AAI33785 I 0.983
Ame_R018465 Ailuropoda melanoleuca Ame_R018465 I 0.800
CAA65321 Xenopus laevis CAA65321 I 0.983
DGIL_AUG5s21g11t1 Acyrtosiphon pisum DGIL_AUG5s21g11t1 N 0.710
ENSETEG00000014461 Echinops telfairi ENSETEG00000014461 I 0.983
ENSETEG00000015825 Echinops telfairi ENSETEG00000015825 I 0.950
ENSETEG00000017849 Echinops telfairi ENSETEG00000017849 I 0.967
ENSMMUG00000017312 Macaca mulatta ENSMMUG00000017312 I 0.983
ENSPPYG00000001240 Pongo pygmaeus ENSPPYG00000001240 I 0.983
estExt_Genewise1Plus.C_900027 Capitella teleta estExt_Genewise1Plus.C_900027 I 0.742
e_gw.173.96.1 Nematostella vectensis e_gw.173.96.1 I 0.726
gw.348.48.1 Branchiostoma floridae gw.348.48.1 I 0.774
LOC100053515 Equus caballus ENSECAG00000014173 I 0.983
LOC100411304 Callithrix jacchus ENSCJAG00000006356 I 0.983
XP_001189132.1 Strongylocentrotus purpuratus XP_001189132.1 N 0.710
XP_785599.1 Strongylocentrotus purpuratus XP_785599.1 N 0.710
zranb2 Xenopus tropicalis ENSXETG00000024108 I 1.000
ZRANB2 Vicugna pacos ENSVPAG00000002940 I 0.950
ZRANB2 Dasypus novemcinctus ENSDNOG00000010455 I 0.783
ZRANB2 Takifugu rubripes ENSTRUG00000003300 I 0.983
ZRANB2 Tetraodon nigroviridis ENSTNIG00000010498 I 0.983
ZRANB2 Spermophilus tridecemlineatus ENSSTOG00000000890 I 0.983
ZRANB2 Homo sapiens ENSG00000132485 D 0.983
zranb2 Danio rerio ENSDARG00000044332 I 1.000
ZRANB2 Cavia porcellus ENSCPOG00000007829 I 0.983
ZRANB2 Oryctolagus cuniculus ENSOCUG00000004640 I 0.983
ZRANB2 Choloepus hoffmanni ENSCHOG00000004408 I 0.983
ZRANB2 Canis familiaris ENSCAFG00000020412 I 0.983
ZRANB2 Anolis carolinensis ENSACAG00000004293 I 1.000
ZRANB2 Sus scrofa ENSSSCG00000003787 I 0.983
ZRANB2 Sorex araneus ENSSARG00000009452 I 0.983
ZRANB2 Gasterosteus aculeatus ENSGACG00000009457 I 1.000
ZRANB2 Gorilla gorilla ENSGGOG00000023501 I 0.983
ZRANB2 Loxodonta africana ENSLAFG00000017760 I 0.983
ZRANB2 Macropus eugenii ENSMEUG00000010336 I 0.800
ZRANB2 Myotis lucifugus ENSMLUG00000001762 I 0.983
ZRANB2 Callithrix jacchus ENSCJAG00000034182 I 0.850
ZRANB2 Monodelphis domestica ENSMODG00000000504 I 0.983
Zranb2 Mus musculus ENSMUSG00000028180 I 0.983
ZRANB2 Ornithorhynchus anatinus ENSOANG00000009905 I 0.800
ZRANB2 Ochotona princeps ENSOPRG00000003839 I 0.983
ZRANB2 Oryzias latipes ENSORLG00000006527 I 0.867
ZRANB2 Procavia capensis ENSPCAG00000015159 I 0.983
Zranb2 Dipodomys ordii ENSDORG00000016348 I 0.983
ZRANB2 Pan troglodytes ENSPTRG00000000856 I 0.983
Zranb2 Rattus norvegicus ENSRNOG00000009990 I 0.983
ZRANB2 Tursiops truncatus ENSTTRG00000014680 I 0.983