estExt_fgenesh1_pg.C_chr_40551 (Mycosphaerella graminicola)
RanBP ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP) IPR001876 estExt_fgenesh1_pg.C_chr_40551 T27402_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_chr_40551 RanBP ZF 140 156
estExt_fgenesh1_pg.C_chr_40551 RanBP ZF 227 251

Links

Other RanBP ZF family RBPs
Other Mycosphaerella graminicola RBPs

20 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB01983.1 Alternaria brassicicola AB01983.1 N 0.744
ACLA_054290 Aspergillus clavatus CADACLAG00005245 N 0.721
AFLA_114740 Aspergillus flavus CADAFLAG00013392 N 0.744
An14g00750 Aspergillus niger CADANGAG00011011 N 0.721
AO090206000081 Aspergillus oryzae CADAORAG00012242 N 0.744
ATEG_02228 Aspergillus terreus CADATEAG00000017 N 0.744
CPSG_05597 Coccidioides posadasii CPSG_05597 N 0.714
estExt_fgenesh1_pg.C_110327 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_110327 N 0.721
estExt_Genewise1.C_30334 Cochliobolus heterostrophus C5 estExt_Genewise1.C_30334 N 0.744
e_gw1.3.693.1 Trichoderma reesei e_gw1.3.693.1 N 0.714
fgenesh1_pg.C_scaffold_13000098 Trichoderma virens fgenesh1_pg.C_scaffold_13000098 N 0.714
fgenesh1_pg.C_scaffold_8000400 Trichoderma atroviride fgenesh1_pg.C_scaffold_8000400 N 0.705
fgenesh1_pm.00795_#_61 Aspergillus carbonarius fgenesh1_pm.00795_#_61 N 0.786
FGSG_05263 Fusarium graminearum FGSG_05263 N 0.714
FOXG_08443 Fusarium oxysporum FOXG_08443 N 0.714
HCAG_08016 Histoplasma capsulatum HCAG_08016 N 0.705
MCYG_02556 Microsporum canis MCYG_02556 N 0.705
Pc13g06240 Penicillium chrysogenum Pc13g06240 N 0.767
PMAA_085380 Penicillium marneffei PMAA_085380 N 0.744
UREG_02651 Uncinocarpus reesii UREG_02651 N 0.721