CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PABG_01156
(
Paracoccidioides brasiliensis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
PABG_01156
T29925_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PABG_01156T0
RRM
348
418
LFVCKLNPVTQDEDLHLIFSRFGPILSCEVIRDKRTGDSLQYAFIEFENQKDCEQAYFKMQGVLIDDHRIH
Links
Other
RRM
family RBPs
Other
Paracoccidioides brasiliensis
RBPs
172 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
DJC17_BOVIN
Bos taurus
ENSBTAG00000013480
N
0.000
DNAJC17
Anolis carolinensis
ENSACAG00000003311
N
0.000
DNAJC17
Macaca mulatta
ENSMMUG00000013160
N
0.000
DNAJC17
Monodelphis domestica
ENSMODG00000000225
N
0.000
Dnajc17
Mus musculus
ENSMUSG00000034278
N
0.000
DNAJC17
Oryctolagus cuniculus
ENSOCUG00000005573
N
0.000
DNAJC17
Otolemur garnettii
ENSOGAG00000000528
N
0.000
DNAJC17
Ochotona princeps
ENSOPRG00000016047
N
0.000
DNAJC17
Procavia capensis
ENSPCAG00000000374
N
0.000
DNAJC17
Pan troglodytes
ENSPTRG00000006929
N
0.000
DNAJC17
Pteropus vampyrus
ENSPVAG00000001843
N
0.000
Dnajc17
Rattus norvegicus
ENSRNOG00000012368
N
0.000
DNAJC17
Sorex araneus
ENSSARG00000000938
N
0.000
DNAJC17
Sus scrofa
ENSSSCG00000004762
N
0.000
DNAJC17
Tupaia belangeri
ENSTBEG00000014488
N
0.000
DNAJC17
Taeniopygia guttata
ENSTGUG00000006661
N
0.000
DNAJC17
Tursiops truncatus
ENSTTRG00000011417
N
0.000
DNAJC17
Microcebus murinus
ENSMICG00000005953
N
0.000
DNAJC17
Cavia porcellus
ENSCPOG00000014110
N
0.000
Dnajc17
Dipodomys ordii
ENSDORG00000000579
N
0.000
DNAJC17
Choloepus hoffmanni
ENSCHOG00000009650
N
0.000
DNAJC17
Canis familiaris
ENSCAFG00000009322
N
0.000
DNAJC17
Felis catus
ENSFCAG00000014715
N
0.000
DNAJC17
Gallus gallus
ENSGALG00000023982
N
0.000
DNAJC17
Gorilla gorilla
ENSGGOG00000000051
N
0.000
DNAJC17
Loxodonta africana
ENSLAFG00000014731
N
0.000
DNAJC17
Macropus eugenii
ENSMEUG00000005641
N
0.000
DNAJC17
Meleagris gallopavo
ENSMGAG00000002902
N
0.000
ENSCJAG00000013145
Callithrix jacchus
ENSCJAG00000013145
N
0.000
ENSGGOG00000028423
Gorilla gorilla
ENSGGOG00000028423
N
0.000
ENSMLUG00000014835
Myotis lucifugus
ENSMLUG00000014835
N
0.000
ENSPPYG00000006360
Pongo pygmaeus
ENSPPYG00000006360
N
0.000
LOC100057200
Equus caballus
ENSECAG00000019839
N
0.000
LOC100409885
Callithrix jacchus
ENSCJAG00000020803
N
0.000
RGD1565752
Rattus norvegicus
ENSRNOG00000038337
N
0.000