SPPG_02323 (Spizellomyces punctatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SPPG_02323 T30813_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM8A
M054_0.6 		Homo sapiens RYGCGCB RNAcompete
Ray et al.(2013)
RNCMPT00056 		0.704
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
SPPG_02323T0 RRM 83 153

Links

Other RRM family RBPs
Other Spizellomyces punctatus RBPs

40 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R013073 Ailuropoda melanoleuca Ame_R013073 I 0.704
B020018G12Rik Mus musculus ENSMUSG00000078184 I 0.704
BDBG_04679 Blastomyces dermatitidis BDBG_04679 N 0.718
CC1G_08323 Coprinopsis cinerea CC1G_08323 N 0.761
ENSETEG00000017932 Echinops telfairi ENSETEG00000017932 I 0.704
ENSLAFG00000021886 Loxodonta africana ENSLAFG00000021886 I 0.704
ENSPCAG00000002146 Procavia capensis ENSPCAG00000002146 I 0.718
ENSPPYG00000000929 Pongo pygmaeus ENSPPYG00000000929 I 0.704
estExt_fgenesh2_kg.C_130331 Serpula lacrymans estExt_fgenesh2_kg.C_130331 I 0.761
estExt_fgenesh2_kg.C_60460 Agaricus bisporus estExt_fgenesh2_kg.C_60460 I 0.746
estExt_fgeneshTA2_pg.C_30296 Trichoplax adhaerens estExt_fgeneshTA2_pg.C_30296 N 0.704
estExt_Genewise1.C_40022 Postia placenta estExt_Genewise1.C_40022 N 0.718
e_gw1.136.78.1 Physcomitrella patens e_gw1.136.78.1 N 0.704
e_gw1.53.304.1 Lottia gigantea e_gw1.53.304.1 I 0.718
e_gw1.6.577.1 Heterobasidion annosum e_gw1.6.577.1 N 0.761
e_gww2.3.582.1 Phanerochaete chrysosporium e_gww2.3.582.1 N 0.746
fgenesh1_kg.C_scaffold_4000104 Schizophyllum commune fgenesh1_kg.C_scaffold_4000104 I 0.761
fgenesh1_pm.C_scaffold_6000172 Pleurotus ostreatus fgenesh1_pm.C_scaffold_6000172 I 0.775
gwEuk.6.623.1 Ostreococcus lucimarinus gwEuk.6.623.1 N 0.732
gww1.22.130.1 Laccaria bicolor gww1.22.130.1 I 0.761
LOC100399389 Callithrix jacchus ENSCJAG00000002209 I 0.704
PABG_01051 Paracoccidioides brasiliensis PABG_01051 N 0.718
Q6DTK7_HORSE Equus caballus ENSECAG00000022024 I 0.704
Rbm8a Rattus norvegicus ENSRNOG00000021215 I 0.704
rbm8a Danio rerio ENSDARG00000016516 I 0.732
RBM8A Felis catus ENSFCAG00000005412 I 0.704
RBM8A Homo sapiens ENSG00000131795 D 0.704
RBM8A Gorilla gorilla ENSGGOG00000005422 I 0.704
RBM8A Cavia porcellus ENSCPOG00000022453 I 0.704
RBM8A Macaca mulatta ENSMMUG00000016051 I 0.704
Rbm8a Mus musculus ENSMUSG00000038374 I 0.704
RBM8A Oryctolagus cuniculus ENSOCUG00000025693 I 0.704
RBM8A Otolemur garnettii ENSOGAG00000000202 I 0.704
RBM8A Canis familiaris ENSCAFG00000023172 I 0.704
RBM8A Pan troglodytes ENSPTRG00000001201 I 0.704
RBM8A Tursiops truncatus ENSTTRG00000009081 I 0.704
RBM8A Sus scrofa ENSSSCG00000006684 I 0.704
RBM8A Pteropus vampyrus ENSPVAG00000014471 I 0.704
RBM8A Sorex araneus ENSSARG00000013289 I 0.704
RBM8A_BOVIN Bos taurus ENSBTAG00000008369 I 0.704