RBM8A (Homo sapiens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSG00000131795 T37251_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM8A
M054_0.6		 Homo sapiens RYGCGCB RNAcompete
Ray et al.(2013)
RNCMPT00056 		(Direct)

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M054_0.6 RRM 54 124

RNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000333001 RRM 75 145
ENSP00000358313 RRM 74 144

Links

Other RRM family RBPs
Other Homo sapiens RBPs

66 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBM8A_BOVIN Bos taurus ENSBTAG00000008369 I 1.000
RBM8A Tursiops truncatus ENSTTRG00000009081 I 1.000
RBM8A Sus scrofa ENSSSCG00000006684 I 1.000
RBM8A Sorex araneus ENSSARG00000013289 I 1.000
Rbm8a Rattus norvegicus ENSRNOG00000021215 I 1.000
RBM8A Felis catus ENSFCAG00000005412 I 1.000
ENSETEG00000017932 Echinops telfairi ENSETEG00000017932 I 1.000
LOC100399389 Callithrix jacchus ENSCJAG00000002209 I 1.000
RBM8A Canis familiaris ENSCAFG00000023172 I 1.000
Ame_R013073 Ailuropoda melanoleuca Ame_R013073 I 1.000
RBM8A Cavia porcellus ENSCPOG00000022453 I 1.000
Q6DTK7_HORSE Equus caballus ENSECAG00000022024 I 1.000
RBM8A Pan troglodytes ENSPTRG00000001201 I 1.000
RBM8A Pteropus vampyrus ENSPVAG00000014471 I 1.000
Rbm8a Mus musculus ENSMUSG00000038374 I 1.000
ENSPPYG00000000929 Pongo pygmaeus ENSPPYG00000000929 I 1.000
RBM8A Macaca mulatta ENSMMUG00000016051 I 1.000
ENSLAFG00000021886 Loxodonta africana ENSLAFG00000021886 I 1.000
RBM8A Gorilla gorilla ENSGGOG00000005422 I 1.000
RBM8A Oryctolagus cuniculus ENSOCUG00000025693 I 1.000
B020018G12Rik Mus musculus ENSMUSG00000078184 I 1.000
RBM8A Otolemur garnettii ENSOGAG00000000202 I 1.000
ENSPCAG00000002146 Procavia capensis ENSPCAG00000002146 I 0.986
RBM8A Monodelphis domestica ENSMODG00000018752 I 0.986
RBM8A Spermophilus tridecemlineatus ENSSTOG00000013917 I 0.958
RBM8A Macropus eugenii ENSMEUG00000016058 I 0.958
rbm8a Danio rerio ENSDARG00000016516 I 0.930
AAG27092 Xenopus laevis AAG27092 I 0.915
Q9DF42 Xenopus laevis Q9DF42 I 0.915
AAH73361 Xenopus laevis AAH73361 I 0.915
Q6PH90 Xenopus laevis Q6PH90 I 0.915
B5FZD1_TAEGU Taeniopygia guttata ENSTGUG00000004447 I 0.915
RBM8A Gasterosteus aculeatus ENSGACG00000013157 I 0.915
Q8JJC6_ORYLA Oryzias latipes ENSORLG00000016263 I 0.915
AAH56659 Xenopus laevis AAH56659 I 0.915
RBM8A Takifugu rubripes ENSTRUG00000013173 I 0.915
RBM8A Tetraodon nigroviridis ENSTNIG00000006869 I 0.901
estExt_Genewise1.C_210127 Daphnia pulex estExt_Genewise1.C_210127 I 0.803
XP_001194199.1 Strongylocentrotus purpuratus XP_001194199.1 I 0.775
XP_792124.1 Strongylocentrotus purpuratus XP_792124.1 I 0.775
Sjc_0039250 Schistosoma japonicum Sjc_0039250 I 0.761
Smp_002550 Schistosoma mansoni Smp_002550 I 0.761
estExt_fgenesh2_pg.C_4600002 Branchiostoma floridae estExt_fgenesh2_pg.C_4600002 I 0.746
e_gw.589.3.1 Branchiostoma floridae e_gw.589.3.1 I 0.746
ENSCSAVG00000005685 Ciona savignyi ENSCSAVG00000005685 I 0.732
e_gw1.53.304.1 Lottia gigantea e_gw1.53.304.1 I 0.732
fgenesh1_kg.C_scaffold_4000104 Schizophyllum commune fgenesh1_kg.C_scaffold_4000104 I 0.718
amel4_ncbi_hmm2170 Apis mellifera amel4_ncbi_hmm2170 I 0.718
GI19803 Drosophila mojavensis FBgn0142540 I 0.704
estExt_fgenesh2_kg.C_130331 Serpula lacrymans estExt_fgenesh2_kg.C_130331 I 0.704
gww1.22.130.1 Laccaria bicolor gww1.22.130.1 I 0.704
ENSCING00000004877 Ciona intestinalis ENSCING00000004877 I 0.704
estExt_fgenesh1_pg.C_1530030 Capitella teleta estExt_fgenesh1_pg.C_1530030 I 0.704
CRE20368 Caenorhabditis remanei CRE20368 I 0.704
CJA17011 Caenorhabditis japonica CJA17011 I 0.704
SPPG_02323 Spizellomyces punctatus SPPG_02323 I 0.704
CpipJ_CPIJ007339 Culex pipiens CpipJ_CPIJ007339 I 0.704
estExt_fgenesh2_kg.C_60460 Agaricus bisporus estExt_fgenesh2_kg.C_60460 I 0.704
fgenesh1_pm.C_scaffold_6000172 Pleurotus ostreatus fgenesh1_pm.C_scaffold_6000172 I 0.704
DGIL_AUG5s13034g4t1 Acyrtosiphon pisum DGIL_AUG5s13034g4t1 I 0.704
DGIL_AUG5s25g7t1 Acyrtosiphon pisum DGIL_AUG5s25g7t1 I 0.704
CBG18074 Caenorhabditis briggsae CBG18074 I 0.704
AGAP006365 Anopheles gambiae AGAP006365 I 0.704
nasonia_NCBI_hmm460663 Nasonia vitripennis nasonia_NCBI_hmm460663 I 0.704
CPIJ007339 Culex quinquefasciatus CPIJ007339 I 0.704