SS1G_13716 (Sclerotinia sclerotiorum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SS1G_13716 T31005_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SS1T_13716 RRM 152 204
SS1T_13716 RRM 243 301
SS1T_13716 RRM 377 442
SS1T_13716 RRM 468 530

Links

Other RRM family RBPs
Other Sclerotinia sclerotiorum RBPs

49 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ACLA_068670 Aspergillus clavatus CADACLAG00006690 N 0.910
AFLA_129820 Aspergillus flavus CADAFLAG00010040 N 0.906
AFUA_2G05670 Aspergillus fumigatus CADAFUAG00003365 N 0.914
An02g14100 Aspergillus niger CADANGAG00002937 N 0.898
ANIA_07480 Aspergillus nidulans CADANIAG00000573 N 0.902
AO090001000681 Aspergillus oryzae CADAORAG00000620 N 0.902
ARB_03865 Arthroderma benhamiae ARB_03865 N 0.885
ATEG_06757 Aspergillus terreus CADATEAG00009116 N 0.898
BC1G_14118 Botrytis cinerea BC1G_14118 N 0.996
BDBG_09466 Blastomyces dermatitidis BDBG_09466 N 0.909
CHGG_05709 Chaetomium globosum CHGG_05709 N 0.913
CIMG_00769 Coccidioides immitis CIMG_00769 N 0.905
CPSG_07981 Coccidioides posadasii CPSG_07981 N 0.898
EAT78895.1 Phaeosphaeria nodorum EAT78895.1 N 0.942
estExt_fgenesh1_pg.C_260060 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_260060 N 0.926
estExt_fgenesh1_pg.C_sca_10_chr8_2_00298 Nectria haematococca estExt_fgenesh1_pg.C_sca_10_chr8_2_00298 N 0.901
estExt_fgenesh1_pm.C_10719 Cryphonectria parasitica estExt_fgenesh1_pm.C_10719 N 0.901
estExt_fgenesh1_pm.C_60118 Neurospora tetrasperma estExt_fgenesh1_pm.C_60118 N 0.913
estExt_fgenesh3_kg.C_190032 Neurospora discreta estExt_fgenesh3_kg.C_190032 N 0.913
estExt_Genewise1.C_240173 Cochliobolus heterostrophus C5 estExt_Genewise1.C_240173 N 0.947
estExt_Genewise1.C_32212 Thielavia terrestris estExt_Genewise1.C_32212 N 0.918
estExt_Genewise1Plus.C_chr_30420 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_30420 N 0.901
e_gw1.10.53.1 Trichoderma virens e_gw1.10.53.1 N 0.893
e_gw1.15.72.1 Trichoderma atroviride e_gw1.15.72.1 N 0.897
e_gw1.17.287.1 Trichoderma reesei e_gw1.17.287.1 N 0.901
fgenesh1_pg.4_#_772 Myceliophthora thermophila fgenesh1_pg.4_#_772 N 0.913
fgenesh1_pm.00082_#_76 Aspergillus carbonarius fgenesh1_pm.00082_#_76 N 0.902
FGSG_05444 Fusarium graminearum FGSG_05444 N 0.909
FOXG_09455 Fusarium oxysporum FOXG_09455 N 0.913
FVEG_07083 Fusarium verticillioides FVEG_07083 N 0.913
GLRG_03643 Colletotrichum graminicola GLRG_03643 N 0.897
GSTUMT00008077001 Tuber melanosporum GSTUMT00008077001 N 0.934
MCYG_03534 Microsporum canis MCYG_03534 N 0.889
MGG_08898 Magnaporthe oryzae MGG_08898 N 0.925
MGYG_03143 Microsporum gypseum MGYG_03143 N 0.885
NCU06459 Neurospora crassa NCU06459 N 0.913
NFIA_082390 Neosartorya fischeri CADNFIAG00007689 N 0.910
PABG_04754 Paracoccidioides brasiliensis PABG_04754 N 0.909
Pa_7_9880 Podospora anserina Pa_7_9880 N 0.909
Pc22g08880 Penicillium chrysogenum Pc22g08880 N 0.897
PMAA_071470 Penicillium marneffei PMAA_071470 N 0.902
PTRG_09392 Pyrenophora tritici repentis PTRG_09392 N 0.951
SNOG_13871 Stagonospora nodorum SNOG_13871 N 0.942
TEQG_01254 Trichophyton equinum TEQG_01254 N 0.885
TERG_04964 Trichophyton rubrum TERG_04964 N 0.885
TESG_05970 Trichophyton tonsurans TESG_05970 N 0.885
UREG_00743 Uncinocarpus reesii UREG_00743 N 0.905
VDAG_06364 Verticillium dahliae VDAG_06364 N 0.905
VDBG_08703 Verticillium albo atrum VDBG_08703 N 0.880