CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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G3BP2
(
Echinops telfairi
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSETEG00000016219
T36991_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
G3BP2
M021_0.6
Homo sapiens
AGGAUDR
RNAcompete
Ray et al.(2013)
RNCMPT00021
0.955
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSETEP00000013145
RRM
332
398
LFVGNLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILIAKTIKFREE
Links
Other
RRM
family RBPs
Other
Echinops telfairi
RBPs
53 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAH45051
Xenopus laevis
AAH45051
I
0.000
AAH72830
Xenopus laevis
AAH72830
I
0.000
Ame_R007258
Ailuropoda melanoleuca
Ame_R007258
I
0.955
ENSCHOG00000010802
Choloepus hoffmanni
ENSCHOG00000010802
I
0.000
ENSCPOG00000006626
Cavia porcellus
ENSCPOG00000006626
I
0.000
ENSDARG00000011704
Danio rerio
ENSDARG00000011704
I
0.866
ENSMODG00000023523
Monodelphis domestica
ENSMODG00000023523
I
0.000
ENSOANG00000004714
Ornithorhynchus anatinus
ENSOANG00000004714
I
0.940
ENSOCUG00000022069
Oryctolagus cuniculus
ENSOCUG00000022069
I
0.000
ENSOCUG00000022143
Oryctolagus cuniculus
ENSOCUG00000022143
I
0.000
ENSPPYG00000014846
Pongo pygmaeus
ENSPPYG00000014846
I
0.955
ENSPPYG00000015968
Pongo pygmaeus
ENSPPYG00000015968
I
0.000
ENSSSCG00000017079
Sus scrofa
ENSSSCG00000017079
I
0.000
ENSSSCG00000017080
Sus scrofa
ENSSSCG00000017080
I
0.000
ENSTBEG00000008258
Tupaia belangeri
ENSTBEG00000008258
I
0.940
ENSTBEG00000012323
Tupaia belangeri
ENSTBEG00000012323
I
0.955
G3bp1
Mus musculus
ENSMUSG00000018583
I
0.000
G3BP1
Loxodonta africana
ENSLAFG00000009182
I
0.000
G3BP1
Meleagris gallopavo
ENSMGAG00000005963
I
0.716
G3bp1
Rattus norvegicus
ENSRNOG00000013186
I
0.000
G3BP1
Ochotona princeps
ENSOPRG00000010562
I
0.000
G3BP1
Microcebus murinus
ENSMICG00000012235
I
0.000
G3BP1
Myotis lucifugus
ENSMLUG00000001581
I
0.000
G3BP1
Pteropus vampyrus
ENSPVAG00000017250
I
0.000
G3BP1
Oryzias latipes
ENSORLG00000011422
I
0.716
G3BP1
Pan troglodytes
ENSPTRG00000017438
I
0.000
G3BP1
Ornithorhynchus anatinus
ENSOANG00000005110
I
0.716
G3BP1
Macaca mulatta
ENSMMUG00000014701
I
0.000
G3BP1
Spermophilus tridecemlineatus
ENSSTOG00000015928
I
0.000
G3BP1
Tupaia belangeri
ENSTBEG00000004386
I
0.000
G3BP1
Erinaceus europaeus
ENSEEUG00000012278
I
0.000
G3BP1
Canis familiaris
ENSCAFG00000017841
I
0.000
g3bp1
Xenopus tropicalis
ENSXETG00000010712
I
0.000
g3bp1
Danio rerio
ENSDARG00000017741
I
0.000
G3BP1
Callithrix jacchus
ENSCJAG00000015407
I
0.000
G3BP1
Vicugna pacos
ENSVPAG00000004461
I
0.000
G3BP1
Anolis carolinensis
ENSACAG00000009792
I
0.000
G3BP1
Tarsius syrichta
ENSTSYG00000004570
I
0.000
G3BP1
Dasypus novemcinctus
ENSDNOG00000018758
I
0.000
G3BP1
Homo sapiens
ENSG00000145907
D
0.000
G3BP1
Tetraodon nigroviridis
ENSTNIG00000012954
I
0.701
G3BP1
Taeniopygia guttata
ENSTGUG00000000753
I
0.716
G3BP1
Gasterosteus aculeatus
ENSGACG00000016848
I
0.000
G3BP1
Echinops telfairi
ENSETEG00000017447
I
0.000
G3BP1_BOVIN
Bos taurus
ENSBTAG00000020309
I
0.000
G3BP2
Procavia capensis
ENSPCAG00000015109
I
0.955
G3BP2
Takifugu rubripes
ENSTRUG00000011405
I
0.881
G3BP2
Oryzias latipes
ENSORLG00000007012
I
0.881
G3BP2
Sorex araneus
ENSSARG00000009503
I
0.955
g3bp2
Xenopus tropicalis
ENSXETG00000000334
I
0.866
G3BP2
Vicugna pacos
ENSVPAG00000010710
I
0.955
G3bp2
Rattus norvegicus
ENSRNOG00000002433
I
0.955
G3BP2
Pan troglodytes
ENSPTRG00000016175
I
0.955
G3BP2
Taeniopygia guttata
ENSTGUG00000001561
I
0.925
G3BP2
Tetraodon nigroviridis
ENSTNIG00000011044
I
0.866
G3BP2
Pteropus vampyrus
ENSPVAG00000010166
I
0.955
G3BP2
Tursiops truncatus
ENSTTRG00000013795
I
0.940
G3BP2
Anolis carolinensis
ENSACAG00000008695
I
0.925
G3BP2
Gasterosteus aculeatus
ENSGACG00000017342
I
0.851
G3BP2
Homo sapiens
ENSG00000138757
D
0.955
G3BP2
Felis catus
ENSFCAG00000010124
I
0.955
G3BP2
Erinaceus europaeus
ENSEEUG00000013436
I
0.955
G3BP2
Equus caballus
ENSECAG00000007917
I
0.955
G3bp2
Dipodomys ordii
ENSDORG00000004825
I
0.955
G3BP2
Dasypus novemcinctus
ENSDNOG00000012491
I
0.925
G3BP2
Danio rerio
ENSDARG00000074572
I
0.866
g3bp2
Danio rerio
ENSDARG00000014790
I
0.836
G3BP2
Cavia porcellus
ENSCPOG00000012052
I
0.955
G3BP2
Choloepus hoffmanni
ENSCHOG00000005346
I
0.925
G3BP2
Canis familiaris
ENSCAFG00000008371
I
0.955
G3BP2
Gallus gallus
ENSGALG00000010882
I
0.925
G3BP2
Gorilla gorilla
ENSGGOG00000014947
I
0.955
G3BP2
Oryctolagus cuniculus
ENSOCUG00000003262
I
0.955
G3bp2
Mus musculus
ENSMUSG00000029405
I
0.955
G3BP2
Monodelphis domestica
ENSMODG00000019205
I
0.940
G3BP2
Ochotona princeps
ENSOPRG00000006307
I
0.955
G3BP2
Macaca mulatta
ENSMMUG00000002153
I
0.955
G3BP2
Myotis lucifugus
ENSMLUG00000004753
I
0.955
G3BP2
Microcebus murinus
ENSMICG00000007795
I
0.955
G3BP2
Meleagris gallopavo
ENSMGAG00000007221
I
0.925
G3BP2
Macropus eugenii
ENSMEUG00000004126
I
0.940
G3BP2
Loxodonta africana
ENSLAFG00000023321
I
0.955
G3BP2
Otolemur garnettii
ENSOGAG00000000157
I
0.955
LOC100060090
Equus caballus
ENSECAG00000003368
I
0.000
LOC100413275
Callithrix jacchus
ENSCJAG00000019897
I
0.955
Q2KJ17_BOVIN
Bos taurus
ENSBTAG00000014041
I
0.955
Q5ZMN1_CHICK
Gallus gallus
ENSGALG00000004160
N
0.000
XM_001367627.1
Monodelphis domestica
ENSMODG00000013903
N
0.000
XM_001369493.1
Monodelphis domestica
ENSMODG00000008993
I
0.000