SRSF6 (Gorilla gorilla)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGGOG00000009808 T37833_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
B52
M334_0.6 		Drosophila melanogaster GRUCAACCNGGCGACMG SELEX
Cook et al.(2011)
802_9111335 		0.760
B52
M126_0.6 		Drosophila melanogaster GGASGRV RNAcompete
Ray et al.(2013)
RNCMPT00134 		0.760
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGGOP00000009578 RRM 4 66
ENSGGOP00000009578 RRM 112 177

Links

Other RRM family RBPs
Other Gorilla gorilla RBPs

139 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
189215 Helobdella robusta 189215 N 0.000
AAH73477 Xenopus laevis AAH73477 N 0.000
Ame_R007841 Ailuropoda melanoleuca Ame_R007841 N 0.000
Aqu1.228495 Amphimedon queenslandica Aqu1.228495 N 0.000
DHX8 Pteropus vampyrus ENSPVAG00000014872 N 0.000
DHX8 Pan troglodytes ENSPTRG00000009246 N 0.000
DHX8 Oryzias latipes ENSORLG00000011951 N 0.000
DHX8 Ochotona princeps ENSOPRG00000014865 N 0.000
DHX8 Oryctolagus cuniculus ENSOCUG00000008014 N 0.000
Dhx8 Mus musculus ENSMUSG00000034931 N 0.000
Dhx8 Rattus norvegicus ENSRNOG00000020772 N 0.000
DHX8 Sorex araneus ENSSARG00000007300 N 0.000
DHX8 Sus scrofa ENSSSCG00000017378 N 0.000
DHX8 Taeniopygia guttata ENSTGUG00000002881 N 0.000
DHX8 Takifugu rubripes ENSTRUG00000002454 N 0.000
DHX8 Tarsius syrichta ENSTSYG00000008782 N 0.000
DHX8 Tursiops truncatus ENSTTRG00000016056 N 0.000
DHX8 Vicugna pacos ENSVPAG00000004605 N 0.000
dhx8 Xenopus tropicalis ENSXETG00000013672 N 0.000
DHX8 Monodelphis domestica ENSMODG00000015181 N 0.000
DHX8 Macaca mulatta ENSMMUG00000012071 N 0.000
DHX8 Felis catus ENSFCAG00000009908 N 0.000
DHX8 Canis familiaris ENSCAFG00000014556 N 0.000
DHX8 Dasypus novemcinctus ENSDNOG00000013606 N 0.000
DHX8 Echinops telfairi ENSETEG00000010986 N 0.000
DHX8 Cavia porcellus ENSCPOG00000000224 N 0.000
DHX8 Homo sapiens ENSG00000067596 N 0.000
DHX8 Gasterosteus aculeatus ENSGACG00000003750 N 0.000
DHX8 Bos taurus ENSBTAG00000008339 N 0.000
DHX8 Anolis carolinensis ENSACAG00000013509 N 0.000
DHX8 Gorilla gorilla ENSGGOG00000000143 N 0.000
DHX8 Loxodonta africana ENSLAFG00000022159 N 0.000
DHX8 Myotis lucifugus ENSMLUG00000000090 N 0.000
Dhx8 Dipodomys ordii ENSDORG00000013845 N 0.000
ENSCING00000001546 Ciona intestinalis ENSCING00000001546 N 0.000
ENSGACG00000003736 Gasterosteus aculeatus ENSGACG00000003736 N 0.000
ENSMLUG00000014389 Myotis lucifugus ENSMLUG00000014389 N 0.000
ENSPPYG00000008357 Pongo pygmaeus ENSPPYG00000008357 N 0.000
ENSTNIG00000002771 Tetraodon nigroviridis ENSTNIG00000002771 N 0.000
ENSTRUG00000004063 Takifugu rubripes ENSTRUG00000004063 N 0.000
ISCW002555 Ixodes scapularis ISCW002555 N 0.000
LOC100051804 Equus caballus ENSECAG00000019601 N 0.000
LOC100394123 Callithrix jacchus ENSCJAG00000010659 N 0.000
LOC425433 Gallus gallus ENSGALG00000008448 N 0.000
LOC771596 Gallus gallus ENSGALG00000001186 N 0.000
PHUM299460 Pediculus humanus PHUM299460 N 0.000
XP_001193417.1 Strongylocentrotus purpuratus XP_001193417.1 N 0.000
XP_799263.2 Strongylocentrotus purpuratus XP_799263.2 N 0.000