CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBPMS2
(
Microcebus murinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMICG00000007355
T38515_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMICP00000006698
RRM
32
96
LFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQPVGFVIFDSRAGAEVAKNALNGIRFDPEN
Links
Other
RRM
family RBPs
Other
Microcebus murinus
RBPs
77 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
A5YBM9_HORSE
Equus caballus
ENSECAG00000015345
N
0.969
AAD16971
Xenopus laevis
AAD16971
N
0.908
AAH60391
Xenopus laevis
AAH60391
N
0.877
AAH81153
Xenopus laevis
AAH81153
N
0.908
AAH97507
Xenopus laevis
AAH97507
N
0.908
AGAP013145
Anopheles gambiae
AGAP013145
I
0.000
Ame_R002022
Ailuropoda melanoleuca
Ame_R002022
N
0.969
Ame_R009021
Ailuropoda melanoleuca
Ame_R009021
N
0.877
cpo
Drosophila melanogaster
FBgn0000363
D
0.000
ENSPPYG00000018487
Pongo pygmaeus
ENSPPYG00000018487
N
0.877
ENSXETG00000010668
Xenopus tropicalis
ENSXETG00000010668
N
0.908
GA16117-RA
Drosophila pseudoobscura
FBgn0076133
I
0.000
GI23706
Drosophila mojavensis
FBgn0146431
I
0.000
ISCW022577
Ixodes scapularis
ISCW022577
I
0.000
LOC100392847
Callithrix jacchus
ENSCJAG00000012366
N
0.877
LOC100409527
Callithrix jacchus
ENSCJAG00000005200
N
0.985
Q2KI55_BOVIN
Bos taurus
ENSBTAG00000033727
N
0.877
Q9YGP5
Xenopus laevis
Q9YGP5
N
0.908
RBPMS
Procavia capensis
ENSPCAG00000013493
N
0.877
RBPMS
Taeniopygia guttata
ENSTGUG00000001776
N
0.877
RBPMS
Oryzias latipes
ENSORLG00000004135
N
0.846
RBPMS
Ochotona princeps
ENSOPRG00000013151
N
0.877
RBPMS
Oryctolagus cuniculus
ENSOCUG00000008572
N
0.877
RBPMS
Homo sapiens
ENSG00000157110
N
0.877
Rbpms
Mus musculus
ENSMUSG00000031586
N
0.877
RBPMS
Pan troglodytes
ENSPTRG00000020135
N
0.877
RBPMS
Pteropus vampyrus
ENSPVAG00000001661
N
0.877
RBPMS
Sorex araneus
ENSSARG00000000274
N
0.877
RBPMS
Sus scrofa
ENSSSCG00000015846
N
0.877
RBPMS
Takifugu rubripes
ENSTRUG00000000041
N
0.846
RBPMS
Tarsius syrichta
ENSTSYG00000013982
N
0.846
RBPMS
Tursiops truncatus
ENSTTRG00000012451
N
0.862
RBPMS
Vicugna pacos
ENSVPAG00000010991
N
0.877
rbpms
Xenopus tropicalis
ENSXETG00000011290
N
0.877
RBPMS
Monodelphis domestica
ENSMODG00000019006
N
0.877
RBPMS
Myotis lucifugus
ENSMLUG00000009391
N
0.877
RBPMS
Anolis carolinensis
ENSACAG00000003012
N
0.877
RBPMS
Loxodonta africana
ENSLAFG00000000209
N
0.877
RBPMS
Gallus gallus
ENSGALG00000010291
N
0.877
RBPMS
Gasterosteus aculeatus
ENSGACG00000019471
N
0.846
RBPMS
Cavia porcellus
ENSCPOG00000012799
N
0.877
RBPMS
Echinops telfairi
ENSETEG00000017582
N
0.877
RBPMS
Meleagris gallopavo
ENSMGAG00000005088
N
0.877
RBPMS
Canis familiaris
ENSCAFG00000006503
N
0.877
RBPMS
Choloepus hoffmanni
ENSCHOG00000008745
N
0.877
RBPMS
Macaca mulatta
ENSMMUG00000000458
N
0.877
RBPMS
Equus caballus
ENSECAG00000020735
N
0.877
RBPMS2
Felis catus
ENSFCAG00000011333
N
0.969
RBPMS2
Echinops telfairi
ENSETEG00000010176
N
0.954
RBPMS2
Tursiops truncatus
ENSTTRG00000011840
N
0.969
RBPMS2
Cavia porcellus
ENSCPOG00000007695
N
0.969
RBPMS2
Takifugu rubripes
ENSTRUG00000016625
N
0.923
Rbpms2
Dipodomys ordii
ENSDORG00000004025
N
0.955
rbpms2
Danio rerio
ENSDARG00000079578
N
0.892
RBPMS2
Danio rerio
ENSDARG00000045930
N
0.908
RBPMS2
Macaca mulatta
ENSMMUG00000013270
N
0.985
RBPMS2
Canis familiaris
ENSCAFG00000017098
N
0.969
RBPMS2
Bos taurus
ENSBTAG00000011037
N
0.969
RBPMS2
Anolis carolinensis
ENSACAG00000012227
N
0.923
RBPMS2
Ornithorhynchus anatinus
ENSOANG00000011802
N
0.908
RBPMS2
Homo sapiens
ENSG00000166831
N
0.985
RBPMS2
Taeniopygia guttata
ENSTGUG00000004722
N
0.938
RBPMS2
Gasterosteus aculeatus
ENSGACG00000017472
N
0.892
RBPMS2
Myotis lucifugus
ENSMLUG00000013394
N
0.969
Rbpms2
Mus musculus
ENSMUSG00000032387
N
0.969
RBPMS2
Oryctolagus cuniculus
ENSOCUG00000010388
N
0.969
RBPMS2
Ochotona princeps
ENSOPRG00000013668
N
0.939
RBPMS2
Oryzias latipes
ENSORLG00000001493
N
0.908
RBPMS2
Meleagris gallopavo
ENSMGAG00000001128
N
0.938
RBPMS2
Loxodonta africana
ENSLAFG00000018725
N
0.969
RBPMS2
Procavia capensis
ENSPCAG00000015797
N
0.969
RBPMS2
Pan troglodytes
ENSPTRG00000007165
N
0.985
RBPMS2
Gorilla gorilla
ENSGGOG00000008984
N
0.985
Rbpms2
Rattus norvegicus
ENSRNOG00000015896
N
0.969
RBPMS2
Sus scrofa
ENSSSCG00000004549
N
0.969
RBPMS2
Pteropus vampyrus
ENSPVAG00000016622
N
0.969
RBPMS2
Spermophilus tridecemlineatus
ENSSTOG00000010055
N
0.954
RBPMS2
Monodelphis domestica
ENSMODG00000010487
N
0.938
RBPMS_CHICK
Gallus gallus
ENSGALG00000002355
N
0.938
RGD1561067
Rattus norvegicus
ENSRNOG00000013328
N
0.877