g3bp1 (Xenopus tropicalis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSXETG00000010712 T42867_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
G3BP1
M302_0.6 		Homo sapiens Sequence logo not available ACCCMYMSGCMS SELEX
Cook et al.(2011)
432_11604510 		0.859
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXETP00000023439 RRM 349 411

Links

Other RRM family RBPs
Other Xenopus tropicalis RBPs

89 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH45051 Xenopus laevis AAH45051 I 0.889
AAH72830 Xenopus laevis AAH72830 I 0.873
Ame_R007258 Ailuropoda melanoleuca Ame_R007258 I 0.731
Ame_R008928 Ailuropoda melanoleuca Ame_R008928 I 0.859
ENSCHOG00000010802 Choloepus hoffmanni ENSCHOG00000010802 I 0.859
ENSCPOG00000006626 Cavia porcellus ENSCPOG00000006626 I 0.844
ENSDARG00000011704 Danio rerio ENSDARG00000011704 I 0.746
ENSMODG00000023523 Monodelphis domestica ENSMODG00000023523 I 0.746
ENSOANG00000004714 Ornithorhynchus anatinus ENSOANG00000004714 I 0.731
ENSOCUG00000022069 Oryctolagus cuniculus ENSOCUG00000022069 I 0.859
ENSOCUG00000022143 Oryctolagus cuniculus ENSOCUG00000022143 I 0.859
ENSPPYG00000014846 Pongo pygmaeus ENSPPYG00000014846 I 0.731
ENSPPYG00000015968 Pongo pygmaeus ENSPPYG00000015968 I 0.859
ENSSSCG00000017079 Sus scrofa ENSSSCG00000017079 I 0.844
ENSSSCG00000017080 Sus scrofa ENSSSCG00000017080 I 0.844
ENSTBEG00000008258 Tupaia belangeri ENSTBEG00000008258 I 0.716
ENSTBEG00000012323 Tupaia belangeri ENSTBEG00000012323 I 0.731
G3BP1 Loxodonta africana ENSLAFG00000009182 I 0.859
G3BP1 Meleagris gallopavo ENSMGAG00000005963 I 0.906
G3bp1 Rattus norvegicus ENSRNOG00000013186 I 0.859
G3BP1 Ochotona princeps ENSOPRG00000010562 I 0.844
G3bp1 Mus musculus ENSMUSG00000018583 I 0.844
G3BP1 Microcebus murinus ENSMICG00000012235 I 0.859
G3BP1 Myotis lucifugus ENSMLUG00000001581 I 0.859
G3BP1 Pteropus vampyrus ENSPVAG00000017250 I 0.859
G3BP1 Oryzias latipes ENSORLG00000011422 I 0.812
G3BP1 Pan troglodytes ENSPTRG00000017438 I 0.859
G3BP1 Ornithorhynchus anatinus ENSOANG00000005110 I 0.891
G3BP1 Macaca mulatta ENSMMUG00000014701 I 0.859
G3BP1 Spermophilus tridecemlineatus ENSSTOG00000015928 I 0.778
G3BP1 Tupaia belangeri ENSTBEG00000004386 I 0.859
G3BP1 Canis familiaris ENSCAFG00000017841 I 0.859
g3bp1 Danio rerio ENSDARG00000017741 I 0.812
G3BP1 Callithrix jacchus ENSCJAG00000015407 I 0.859
G3BP1 Vicugna pacos ENSVPAG00000004461 I 0.859
G3BP1 Tarsius syrichta ENSTSYG00000004570 I 0.844
G3BP1 Dasypus novemcinctus ENSDNOG00000018758 I 0.859
G3BP1 Tetraodon nigroviridis ENSTNIG00000012954 I 0.797
G3BP1 Anolis carolinensis ENSACAG00000009792 I 0.905
G3BP1 Homo sapiens ENSG00000145907 D 0.859
G3BP1 Gasterosteus aculeatus ENSGACG00000016848 I 0.828
G3BP1 Taeniopygia guttata ENSTGUG00000000753 I 0.906
G3BP1 Echinops telfairi ENSETEG00000017447 I 0.859
G3BP1 Erinaceus europaeus ENSEEUG00000012278 I 0.859
G3BP1_BOVIN Bos taurus ENSBTAG00000020309 I 0.859
G3BP2 Procavia capensis ENSPCAG00000015109 I 0.731
G3BP2 Oryzias latipes ENSORLG00000007012 I 0.791
g3bp2 Xenopus tropicalis ENSXETG00000000334 I 0.742
G3BP2 Vicugna pacos ENSVPAG00000010710 I 0.731
G3BP2 Sorex araneus ENSSARG00000009503 I 0.731
G3bp2 Rattus norvegicus ENSRNOG00000002433 I 0.731
G3BP2 Tursiops truncatus ENSTTRG00000013795 I 0.716
G3BP2 Pan troglodytes ENSPTRG00000016175 I 0.731
G3BP2 Pteropus vampyrus ENSPVAG00000010166 I 0.731
G3BP2 Takifugu rubripes ENSTRUG00000011405 I 0.716
G3BP2 Taeniopygia guttata ENSTGUG00000001561 I 0.746
G3BP2 Tetraodon nigroviridis ENSTNIG00000011044 I 0.746
G3BP2 Anolis carolinensis ENSACAG00000008695 I 0.746
G3BP2 Gasterosteus aculeatus ENSGACG00000017342 I 0.776
G3BP2 Homo sapiens ENSG00000138757 D 0.731
G3BP2 Felis catus ENSFCAG00000010124 I 0.731
G3BP2 Erinaceus europaeus ENSEEUG00000013436 I 0.731
G3BP2 Equus caballus ENSECAG00000007917 I 0.731
G3bp2 Dipodomys ordii ENSDORG00000004825 I 0.731
G3BP2 Dasypus novemcinctus ENSDNOG00000012491 I 0.716
G3BP2 Danio rerio ENSDARG00000074572 I 0.746
g3bp2 Danio rerio ENSDARG00000014790 I 0.746
G3BP2 Cavia porcellus ENSCPOG00000012052 I 0.731
G3BP2 Choloepus hoffmanni ENSCHOG00000005346 I 0.701
G3BP2 Canis familiaris ENSCAFG00000008371 I 0.731
G3BP2 Gallus gallus ENSGALG00000010882 I 0.746
G3BP2 Gorilla gorilla ENSGGOG00000014947 I 0.731
G3BP2 Oryctolagus cuniculus ENSOCUG00000003262 I 0.731
G3bp2 Mus musculus ENSMUSG00000029405 I 0.731
G3BP2 Monodelphis domestica ENSMODG00000019205 I 0.731
G3BP2 Ochotona princeps ENSOPRG00000006307 I 0.731
G3BP2 Macaca mulatta ENSMMUG00000002153 I 0.731
G3BP2 Myotis lucifugus ENSMLUG00000004753 I 0.731
G3BP2 Microcebus murinus ENSMICG00000007795 I 0.731
G3BP2 Meleagris gallopavo ENSMGAG00000007221 I 0.746
G3BP2 Macropus eugenii ENSMEUG00000004126 I 0.731
G3BP2 Loxodonta africana ENSLAFG00000023321 I 0.731
G3BP2 Otolemur garnettii ENSOGAG00000000157 I 0.731
LOC100060090 Equus caballus ENSECAG00000003368 I 0.859
LOC100413275 Callithrix jacchus ENSCJAG00000019897 I 0.731
Q2KJ17_BOVIN Bos taurus ENSBTAG00000014041 I 0.731
Q5ZMN1_CHICK Gallus gallus ENSGALG00000004160 N 0.831
XM_001367627.1 Monodelphis domestica ENSMODG00000013903 N 0.771
XM_001369493.1 Monodelphis domestica ENSMODG00000008993 I 0.857