GSVIVG00021851001 (Vitis vinifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GSVIVG00021851001 T44702_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00021851001 RRM 56 126

Links

Other RRM family RBPs
Other Vitis vinifera RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29428.m000321 Ricinus communis 29428.m000321 N 0.789
AT5G04600 Arabidopsis thaliana AT5G04600-TAIR-G N 0.732
B9HW06_POPTR Populus trichocarpa POPTR_0010s24120 N 0.817
BRADI3G35650 Brachypodium distachyon BRADI3G35650 N 0.789
cassava18017.valid.m1 Manihot esculenta cassava18017.valid.m1 N 0.746
CC1G_06273 Coprinopsis cinerea CC1G_06273 N 0.732
Cucsa.364800 Cucumis sativus Cucsa.364800 N 0.845
e_gw1.10.335.1 Mucor circinelloides e_gw1.10.335.1 N 0.718
e_gw1.35.197.1 Physcomitrella patens e_gw1.35.197.1 N 0.718
Glyma02g29190.1 Glycine max Glyma02g29190.1 N 0.831
Glyma09g17080.1 Glycine max Glyma09g17080.1 N 0.831
GRMZM2G056350 Zea mays GRMZM2G056350 N 0.761
gw1.198.122.1 Physcomitrella patens gw1.198.122.1 N 0.746
LOC_Os08g31810 Oryza sativa LOC_Os08g31810 N 0.803
MDP0000340057 Malus x domestica MDP0000340057 N 0.831
Medtr1g137330 Medicago truncatula Medtr1g137330 N 0.831
Medtr8g129780 Medicago truncatula Medtr8g129780 N 0.859
mgf009918m Mimulus guttatus mgf009918m N 0.817
PK02111.1 Cannabis sativa PK02111.1 N 0.789
ppa025985m Prunus persica ppa025985m N 0.859
Sb03g045720 Sorghum bicolor Sb03g045720 N 0.803
XM_002871058.1 Arabidopsis lyrata scaffold_600404.1 N 0.732