NCLIV_021850 (Neospora caninum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 NCLIV_021850 T47166_0.6 EuPathDB (2010-Sep-21)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
NCLIV_021850 RRM 127 197

Links

Other RRM family RBPs
Other Neospora caninum RBPs

45 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29680.m001693 Ricinus communis 29680.m001693 I 0.718
B9I5N8_POPTR Populus trichocarpa POPTR_0013s04390 I 0.718
B9IPA5_POPTR Populus trichocarpa POPTR_0019s03570 I 0.732
BGIOSIBCE007866 Oryza indica BGIOSIBCE007866 I 0.732
BGIOSIBCE028936 Oryza indica BGIOSIBCE028936 I 0.704
BRADI3G49130 Brachypodium distachyon BRADI3G49130 I 0.718
cassava22669.valid.m1 Manihot esculenta cassava22669.valid.m1 I 0.718
cgd1_1070 Cryptosporidium parvum cgd1_1070 N 0.704
Chro.10128 Cryptosporidium hominis Chro.10128 N 0.704
Cucsa.178480 Cucumis sativus Cucsa.178480 I 0.718
EDO06441.1 Babesia bovis EDO06441.1 N 0.704
estExt_fgenesh2_pg.C_360096 Branchiostoma floridae estExt_fgenesh2_pg.C_360096 I 0.732
estExt_fgenesh2_pg.C_7640002 Branchiostoma floridae estExt_fgenesh2_pg.C_7640002 I 0.732
estExt_Genewise1Plus.C_1180017 Capitella teleta estExt_Genewise1Plus.C_1180017 I 0.761
e_gw1.156.67.1 Physcomitrella patens e_gw1.156.67.1 I 0.732
Glyma10g30900.1 Glycine max Glyma10g30900.1 I 0.718
Glyma20g36570.1 Glycine max Glyma20g36570.1 I 0.718
GRMZM2G068255 Zea mays GRMZM2G068255 I 0.704
GRMZM2G125529 Zea mays GRMZM2G125529 I 0.704
GSPATP00035306001 Paramecium tetraurelia GSPATP00035306001 N 0.761
GSVIVG00016104001 Vitis vinifera GSVIVG00016104001 I 0.718
GSVIVG00023509001 Vitis vinifera GSVIVG00023509001 I 0.718
LjSGA_021949.1 Lotus japonicus LjSGA_021949.1 I 0.704
LOC_Os02g40900 Oryza sativa LOC_Os02g40900 I 0.718
LOC_Os08g45240 Oryza sativa LOC_Os08g45240 I 0.704
MDP0000283678 Malus x domestica MDP0000283678 I 0.704
MDP0000320908 Malus x domestica MDP0000320908 I 0.704
Medtr1g093610 Medicago truncatula Medtr1g093610 I 0.704
mgf021739m Mimulus guttatus mgf021739m I 0.732
PDK_20s1301681g005 Phoenix dactylifera PDK_20s1301681g005 I 0.718
PDK_20s1323974g003 Phoenix dactylifera PDK_20s1323974g003 I 0.718
PHUM106890 Pediculus humanus PHUM106890 I 0.732
PK16312.1 Cannabis sativa PK16312.1 I 0.704
ppa010477m Prunus persica ppa010477m I 0.704
RBM42 Gasterosteus aculeatus ENSGACG00000004170 I 0.704
RBM42 Oryzias latipes ENSORLG00000003387 I 0.704
RBM42 Tetraodon nigroviridis ENSTNIG00000011669 I 0.704
RBM42 Takifugu rubripes ENSTRUG00000004663 I 0.704
Sb02g038420 Sorghum bicolor Sb02g038420 I 0.704
SPPG_03010 Spizellomyces punctatus SPPG_03010 I 0.718
TA12210 Theileria annulata TA12210 N 0.718
TGGT1_017860 Toxoplasma gondii TGGT1_017860 N 0.972
TGME49_003080 Toxoplasma gondii TGME49_003080 N 0.972
TGVEG_046310 Toxoplasma gondii TGVEG_046310 N 0.972
TP02_0264 Theileria parva TP02_0264 N 0.732