e_gwh2.2.847.1 (Phanerochaete chrysosporium)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gwh2.2.847.1 T50298_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PABPN1
M148_0.6 		Homo sapiens ARAAGA RNAcompete
Ray et al.(2013)
RNCMPT00157 		0.700
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
e_gwh2.2.847.1 RRM 56 125

Links

Other RRM family RBPs
Other Phanerochaete chrysosporium RBPs

44 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ACLA_026010 Aspergillus clavatus CADACLAG00002760 N 0.704
AFUA_1G09490 Aspergillus fumigatus CADAFUAG00007045 N 0.704
ANIA_01340 Aspergillus nidulans CADANIAG00001272 N 0.704
BDBG_02376 Blastomyces dermatitidis BDBG_02376 N 0.704
Bm1_48895 Brugia malayi Bm1_48895 I 0.714
CC1G_14585 Coprinopsis cinerea CC1G_14585 N 0.789
CIMG_07119 Coccidioides immitis CIMG_07119 N 0.718
CNBG_5499 Cryptococcus neoformans CNBG_5499 N 0.704
CPSG_01188 Coccidioides posadasii CPSG_01188 N 0.718
EDP44971.1 Malassezia globosa EDP44971.1 N 0.775
estExt_fgenesh1_pm.C_10518 Schizophyllum commune estExt_fgenesh1_pm.C_10518 N 0.814
estExt_fgenesh2_kg.C_50198 Thielavia terrestris estExt_fgenesh2_kg.C_50198 N 0.700
estExt_fgenesh2_pm.C_40328 Serpula lacrymans estExt_fgenesh2_pm.C_40328 N 0.843
estExt_fgenesh3_pg.C_140127 Postia placenta estExt_fgenesh3_pg.C_140127 N 0.857
estExt_Genewise1Plus.C_40474 Tremella mesenterica estExt_Genewise1Plus.C_40474 N 0.704
estExt_Genewise1Plus.C_chr_120039 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_120039 N 0.704
e_gw1.29.77.1 Phycomyces blakesleeanus e_gw1.29.77.1 I 0.704
e_gw1.4.1867.1 Agaricus bisporus e_gw1.4.1867.1 N 0.845
e_gw1.4.2157.1 Pleurotus ostreatus e_gw1.4.2157.1 N 0.831
e_gw1.4.778.1 Heterobasidion annosum e_gw1.4.778.1 N 0.857
fgenesh1_pm.00083_#_765 Aspergillus carbonarius fgenesh1_pm.00083_#_765 N 0.704
fgenesh2_pm.scaffold_317000002 Branchiostoma floridae fgenesh2_pm.scaffold_317000002 I 0.700
GP3.065690 Batrachochytrium dendrobatidis GP3.065690 N 0.718
GSTUMT00011743001 Tuber melanosporum GSTUMT00011743001 N 0.704
gw1.9.516.1 Lottia gigantea gw1.9.516.1 I 0.743
gww1.2.642.1 Laccaria bicolor gww1.2.642.1 N 0.803
LOAG_03634 Loa loa LOAG_03634 I 0.714
MCYG_08495 Microsporum canis MCYG_08495 N 0.732
MGYG_08646 Microsporum gypseum MGYG_08646 N 0.746
NFIA_016120 Neosartorya fischeri CADNFIAG00000670 N 0.704
PABG_00587 Paracoccidioides brasiliensis PABG_00587 N 0.704
PABPN1 Takifugu rubripes ENSTRUG00000006554 I 0.714
PABPN1 Tetraodon nigroviridis ENSTNIG00000005369 I 0.714
PABPN1 Oryzias latipes ENSORLG00000006136 I 0.714
pabpn1 Danio rerio ENSDARG00000045373 I 0.729
PABPN1 Gasterosteus aculeatus ENSGACG00000002167 I 0.714
PMAA_025390 Penicillium marneffei PMAA_025390 N 0.718
RO3G_09831 Rhizopus oryzae RO3G_09831 N 0.732
SPPG_00782 Spizellomyces punctatus SPPG_00782 N 0.775
TERG_02884 Trichophyton rubrum TERG_02884 N 0.746
TESG_01534 Trichophyton tonsurans TESG_01534 N 0.746
UM02401 Ustilago maydis UM02401 N 0.761
UREG_05781 Uncinocarpus reesii UREG_05781 N 0.704
WUBG_04965 Wuchereria bancrofti WUBG_04965 I 0.714