CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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BDBG_02376
(
Blastomyces dermatitidis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
BDBG_02376
T28283_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
BDBG_02376T0
RRM
68
137
IFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQALVLNESVFRGRNLK
Links
Other
RRM
family RBPs
Other
Blastomyces dermatitidis
RBPs
65 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PABG_00587
Paracoccidioides brasiliensis
PABG_00587
N
1.000
GSTUMT00011743001
Tuber melanosporum
GSTUMT00011743001
N
0.986
PMAA_025390
Penicillium marneffei
PMAA_025390
N
0.986
UREG_05781
Uncinocarpus reesii
UREG_05781
N
0.986
ANIA_01340
Aspergillus nidulans
CADANIAG00001272
N
0.971
ACLA_026010
Aspergillus clavatus
CADACLAG00002760
N
0.971
fgenesh1_pm.00083_#_765
Aspergillus carbonarius
fgenesh1_pm.00083_#_765
N
0.971
NFIA_016120
Neosartorya fischeri
CADNFIAG00000670
N
0.971
CIMG_07119
Coccidioides immitis
CIMG_07119
N
0.971
CPSG_01188
Coccidioides posadasii
CPSG_01188
N
0.971
AFUA_1G09490
Aspergillus fumigatus
CADAFUAG00007045
N
0.971
MCYG_08495
Microsporum canis
MCYG_08495
N
0.957
Pc16g02770
Penicillium chrysogenum
Pc16g02770
N
0.957
AO090012000924
Aspergillus oryzae
CADAORAG00006445
N
0.957
An08g01040
Aspergillus niger
CADANGAG00006423
N
0.957
NCU03946
Neurospora crassa
NCU03946
N
0.943
VDBG_00465
Verticillium albo atrum
VDBG_00465
N
0.943
TESG_01534
Trichophyton tonsurans
TESG_01534
N
0.943
VDAG_00074
Verticillium dahliae
VDAG_00074
N
0.943
estExt_fgenesh2_kg.C_20042
Neurospora tetrasperma
estExt_fgenesh2_kg.C_20042
N
0.943
MGYG_08646
Microsporum gypseum
MGYG_08646
N
0.943
GLRG_10164
Colletotrichum graminicola
GLRG_10164
N
0.943
BC1G_07056
Botrytis cinerea
BC1G_07056
N
0.943
TERG_02884
Trichophyton rubrum
TERG_02884
N
0.943
estExt_fgenesh3_kg.C_60298
Neurospora discreta
estExt_fgenesh3_kg.C_60298
N
0.943
SS1G_03706
Sclerotinia sclerotiorum
SS1G_03706
N
0.943
e_gw1.5.977.1
Nectria haematococca
e_gw1.5.977.1
N
0.943
gw1.9.853.1
Trichoderma virens
gw1.9.853.1
N
0.929
estExt_fgenesh1_pm.C_10632
Trichoderma atroviride
estExt_fgenesh1_pm.C_10632
N
0.929
e_gw1.4.511.1
Trichoderma reesei
e_gw1.4.511.1
N
0.929
MGG_07252
Magnaporthe oryzae
MGG_07252
N
0.929
e_gw1.7.1421.1
Cryphonectria parasitica
e_gw1.7.1421.1
N
0.914
FOXG_05189
Fusarium oxysporum
FOXG_05189
N
0.914
FVEG_02944
Fusarium verticillioides
FVEG_02944
N
0.914
SNOG_05129
Stagonospora nodorum
SNOG_05129
N
0.900
EAT87520.1
Phaeosphaeria nodorum
EAT87520.1
N
0.900
FGSG_10271
Fusarium graminearum
FGSG_10271
N
0.886
AB03725.1
Alternaria brassicicola
AB03725.1
N
0.871
PTRG_03828
Pyrenophora tritici repentis
PTRG_03828
N
0.871
estExt_Genewise1Plus.C_chr_120039
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_120039
N
0.871
estExt_Genewise1.C_100240
Cochliobolus heterostrophus C5
estExt_Genewise1.C_100240
N
0.871
estExt_fgenesh2_kg.C_50198
Thielavia terrestris
estExt_fgenesh2_kg.C_50198
N
0.859
estExt_fgenesh1_kg.C_50066
Myceliophthora thermophila
estExt_fgenesh1_kg.C_50066
N
0.845
CHGG_08656
Chaetomium globosum
CHGG_08656
N
0.845
UM02401
Ustilago maydis
UM02401
N
0.814
CNBG_5499
Cryptococcus neoformans
CNBG_5499
N
0.800
estExt_Genewise1Plus.C_40474
Tremella mesenterica
estExt_Genewise1Plus.C_40474
N
0.786
EDP44971.1
Malassezia globosa
EDP44971.1
N
0.786
Pa_4_2600
Podospora anserina
Pa_4_2600
N
0.775
RO3G_09831
Rhizopus oryzae
RO3G_09831
N
0.771
estExt_Genewise1.C_11041
Mucor circinelloides
estExt_Genewise1.C_11041
N
0.771
PredSwiss_CON654.3
Pneumocystis carinii
PredSwiss_CON654.3
I
0.771
SPPG_00782
Spizellomyces punctatus
SPPG_00782
N
0.757
fgenesh1_pm.C_scaffold_6000038
Sporobolomyces roseus
fgenesh1_pm.C_scaffold_6000038
N
0.757
e_gw1.29.77.1
Phycomyces blakesleeanus
e_gw1.29.77.1
I
0.743
estExt_fgenesh2_pm.C_40328
Serpula lacrymans
estExt_fgenesh2_pm.C_40328
N
0.732
CC1G_14585
Coprinopsis cinerea
CC1G_14585
N
0.729
e_gw1.4.1867.1
Agaricus bisporus
e_gw1.4.1867.1
N
0.729
e_gw1.4.2157.1
Pleurotus ostreatus
e_gw1.4.2157.1
N
0.714
estExt_fgenesh3_pg.C_140127
Postia placenta
estExt_fgenesh3_pg.C_140127
N
0.704
e_gw1.4.778.1
Heterobasidion annosum
e_gw1.4.778.1
N
0.704
e_gwh2.2.847.1
Phanerochaete chrysosporium
e_gwh2.2.847.1
I
0.704
gw1.7.208.1
Melampsora laricis populina
gw1.7.208.1
N
0.700
GP3.065690
Batrachochytrium dendrobatidis
GP3.065690
N
0.700
gww1.2.642.1
Laccaria bicolor
gww1.2.642.1
N
0.700