LOAG_03634 (Loa loa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 LOAG_03634 T29595_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PABPN1
M148_0.6 		Homo sapiens ARAAGA RNAcompete
Ray et al.(2013)
RNCMPT00157 		0.871
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
LOAG_03634T0 RRM 93 162

Links

Other RRM family RBPs
Other Loa loa RBPs

97 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Bm1_48895 Brugia malayi Bm1_48895 I 1.000
WUBG_04965 Wuchereria bancrofti WUBG_04965 I 1.000
pabpn1 Danio rerio ENSDARG00000045373 I 0.900
PABPN1 Oryzias latipes ENSORLG00000006136 I 0.886
PABPN1 Gasterosteus aculeatus ENSGACG00000002167 I 0.886
PABPN1 Takifugu rubripes ENSTRUG00000006554 I 0.886
PABPN1 Tetraodon nigroviridis ENSTNIG00000005369 I 0.886
AAH45063 Xenopus laevis AAH45063 I 0.859
AAR26262 Xenopus laevis AAR26262 I 0.859
Q7ZXB8 Xenopus laevis Q7ZXB8 I 0.859
AAH73657 Xenopus laevis AAH73657 I 0.859
Q9DDY9 Xenopus laevis Q9DDY9 I 0.859
AAG36902 Xenopus laevis AAG36902 I 0.859
fgenesh2_pm.scaffold_317000002 Branchiostoma floridae fgenesh2_pm.scaffold_317000002 I 0.857
Pabpn1 Mus musculus ENSMUSG00000022194 I 0.845
PABPN1 Loxodonta africana ENSLAFG00000031227 I 0.845
PABPN1 Oryctolagus cuniculus ENSOCUG00000016174 I 0.845
PABPN1 Gorilla gorilla ENSGGOG00000022683 I 0.845
PABPN1 Macaca mulatta ENSMMUG00000014747 I 0.845
PABPN1 Pteropus vampyrus ENSPVAG00000005270 I 0.845
pabpn1 Xenopus tropicalis ENSXETG00000014597 I 0.845
Ame_R020627 Ailuropoda melanoleuca Ame_R020627 I 0.845
PABPN1 Homo sapiens ENSG00000100836 D 0.845
PABPN1 Sus scrofa ENSSSCG00000002023 I 0.845
PABPN1 Pan troglodytes ENSPTRG00000006168 I 0.845
Pabpn1 Rattus norvegicus ENSRNOG00000042195 I 0.845
PABPN1 Otolemur garnettii ENSOGAG00000008710 I 0.845
ENSPPYG00000005663 Pongo pygmaeus ENSPPYG00000005663 I 0.845
PABP2_BOVIN Bos taurus ENSBTAG00000006884 I 0.845
B2CL2_CANFA Canis familiaris ENSCAFG00000011482 I 0.845
LOC100396934 Callithrix jacchus ENSCJAG00000007960 I 0.845
PABPN1 Cavia porcellus ENSCPOG00000025574 I 0.845
Pabpn1 Dipodomys ordii ENSDORG00000002873 I 0.845
LOC100055599 Equus caballus ENSECAG00000011652 I 0.845
PABPN1 Anolis carolinensis ENSACAG00000006185 I 0.845
ENSBTAG00000001853 Bos taurus ENSBTAG00000001853 I 0.845
PABPN1 Ornithorhynchus anatinus ENSOANG00000009218 I 0.831
e_gw1.14.113.1 Trichoplax adhaerens e_gw1.14.113.1 I 0.831
gw1.9.516.1 Lottia gigantea gw1.9.516.1 I 0.829
PABPN1 Myotis lucifugus ENSMLUG00000012452 I 0.817
ENSEEUG00000012973 Erinaceus europaeus ENSEEUG00000012973 I 0.803
PABPN1 Monodelphis domestica ENSMODG00000004535 I 0.803
ENSOCUG00000008701 Oryctolagus cuniculus ENSOCUG00000008701 I 0.789
BGIBMGA001950 Bombyx mori BGIBMGA001950 I 0.789
PHUM037550 Pediculus humanus PHUM037550 I 0.775
amel4_ncbi_hmm446 Apis mellifera amel4_ncbi_hmm446 I 0.775
estExt_Genewise1.C_30355 Daphnia pulex estExt_Genewise1.C_30355 I 0.775
DGIL_AUG5s13013g8t1 Acyrtosiphon pisum DGIL_AUG5s13013g8t1 I 0.775
estExt_Genewise1Plus.C_2670068 Capitella teleta estExt_Genewise1Plus.C_2670068 I 0.775
e_gw.21.136.1 Nematostella vectensis e_gw.21.136.1 I 0.771
e_gw.341.11.1 Branchiostoma floridae e_gw.341.11.1 I 0.761
GD10545 Drosophila simulans FBgn0182316 I 0.746
GM21011 Drosophila sechellia FBgn0175892 I 0.746
GI19259 Drosophila mojavensis FBgn0141998 I 0.746
GH21908 Drosophila grimshawi FBgn0129369 I 0.746
GJ22134 Drosophila virilis FBgn0209248 I 0.746
156918 Helobdella robusta 156918 I 0.746
XP_002163300.1 Hydra magnipapillata XP_002163300.1 I 0.746
AAEL015143 Aedes aegypti AAEL015143 I 0.746
CpipJ_CPIJ004581 Culex pipiens CpipJ_CPIJ004581 I 0.746
AGAP005117 Anopheles gambiae AGAP005117 I 0.746
GK23192 Drosophila willistoni FBgn0225154 I 0.746
GG23338 Drosophila erecta FBgn0115489 I 0.746
GF13666 Drosophila ananassae FBgn0090694 I 0.746
XM_001117810.1 Macaca mulatta ENSMMUG00000029383 I 0.746
XM_001100533.1 Macaca mulatta ENSMMUG00000012438 I 0.746
CPIJ004581 Culex quinquefasciatus CPIJ004581 I 0.746
PABPN1 Procavia capensis ENSPCAG00000005902 I 0.746
Pabp2 Drosophila yakuba FBgn0068105 I 0.746
Pabp2 Drosophila melanogaster FBgn0005648 I 0.746
GA15278-RA Drosophila pseudoobscura FBgn0075302 I 0.746
Aqu1.225190 Amphimedon queenslandica Aqu1.225190 I 0.743
ENSCSAVG00000002001 Ciona savignyi ENSCSAVG00000002001 I 0.743
GL17107 Drosophila persimilis FBgn0154711 I 0.732
ENSPPYG00000007655 Pongo pygmaeus ENSPPYG00000007655 I 0.732
PABPN1L Pan troglodytes ENSPTRG00000031120 I 0.732
PABPN1L Homo sapiens ENSG00000205022 I 0.732
ENSCING00000012468 Ciona intestinalis ENSCING00000012468 I 0.729
CBN00953 Caenorhabditis brenneri CBN00953 I 0.718
Smp_007630 Schistosoma mansoni Smp_007630 I 0.718
Sjc_0053490 Schistosoma japonicum Sjc_0053490 I 0.718
CBG03741 Caenorhabditis briggsae CBG03741 I 0.718
CBN10290 Caenorhabditis brenneri CBN10290 I 0.718
CJA15148 Caenorhabditis japonica CJA15148 I 0.718
PGTG_01300 Puccinia graminis PGTG_01300 N 0.718
CRE07990 Caenorhabditis remanei CRE07990 I 0.718
estExt_fgenesh1_pm.C_1750006 Capitella teleta estExt_fgenesh1_pm.C_1750006 I 0.718
PTTG_05043 Puccinia triticina PTTG_05043 N 0.718
LOC100051357 Equus caballus ENSECAG00000000378 I 0.714
PPA11675 Pristionchus pacificus PPA11675 I 0.714
XP_799120.1 Strongylocentrotus purpuratus XP_799120.1 I 0.714
e_gwh2.2.847.1 Phanerochaete chrysosporium e_gwh2.2.847.1 I 0.714
PABPN1L Ornithorhynchus anatinus ENSOANG00000013901 I 0.704
CBN16301 Caenorhabditis brenneri CBN16301 I 0.704
pabp-2 Caenorhabditis elegans C17E4.5 I 0.704
PABPN1L Otolemur garnettii ENSOGAG00000000433 I 0.700
PABPN1L Cavia porcellus ENSCPOG00000025951 I 0.700