estExt_Genewise1Plus.C_chr_120039 (Mycosphaerella graminicola)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_Genewise1Plus.C_chr_120039 T51519_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_chr_120039 RRM 76 145

Links

Other RRM family RBPs
Other Mycosphaerella graminicola RBPs

67 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CPSG_01188 Coccidioides posadasii CPSG_01188 N 0.886
TERG_02884 Trichophyton rubrum TERG_02884 N 0.886
TESG_01534 Trichophyton tonsurans TESG_01534 N 0.886
UREG_05781 Uncinocarpus reesii UREG_05781 N 0.886
CIMG_07119 Coccidioides immitis CIMG_07119 N 0.886
MGYG_08646 Microsporum gypseum MGYG_08646 N 0.886
PMAA_025390 Penicillium marneffei PMAA_025390 N 0.871
BDBG_02376 Blastomyces dermatitidis BDBG_02376 N 0.871
PABG_00587 Paracoccidioides brasiliensis PABG_00587 N 0.871
MCYG_08495 Microsporum canis MCYG_08495 N 0.871
An08g01040 Aspergillus niger CADANGAG00006423 N 0.871
GSTUMT00011743001 Tuber melanosporum GSTUMT00011743001 N 0.871
AFUA_1G09490 Aspergillus fumigatus CADAFUAG00007045 N 0.857
ACLA_026010 Aspergillus clavatus CADACLAG00002760 N 0.857
fgenesh1_pm.00083_#_765 Aspergillus carbonarius fgenesh1_pm.00083_#_765 N 0.857
ANIA_01340 Aspergillus nidulans CADANIAG00001272 N 0.857
NFIA_016120 Neosartorya fischeri CADNFIAG00000670 N 0.857
estExt_fgenesh2_kg.C_50198 Thielavia terrestris estExt_fgenesh2_kg.C_50198 N 0.845
estExt_Genewise1.C_100240 Cochliobolus heterostrophus C5 estExt_Genewise1.C_100240 N 0.843
VDAG_00074 Verticillium dahliae VDAG_00074 N 0.843
VDBG_00465 Verticillium albo atrum VDBG_00465 N 0.843
SNOG_05129 Stagonospora nodorum SNOG_05129 N 0.843
estExt_fgenesh3_kg.C_60298 Neurospora discreta estExt_fgenesh3_kg.C_60298 N 0.843
estExt_fgenesh2_kg.C_20042 Neurospora tetrasperma estExt_fgenesh2_kg.C_20042 N 0.843
AO090012000924 Aspergillus oryzae CADAORAG00006445 N 0.843
GLRG_10164 Colletotrichum graminicola GLRG_10164 N 0.843
e_gw1.5.977.1 Nectria haematococca e_gw1.5.977.1 N 0.843
NCU03946 Neurospora crassa NCU03946 N 0.843
PTRG_03828 Pyrenophora tritici repentis PTRG_03828 N 0.843
Pc16g02770 Penicillium chrysogenum Pc16g02770 N 0.843
e_gw1.7.1421.1 Cryphonectria parasitica e_gw1.7.1421.1 N 0.843
AB03725.1 Alternaria brassicicola AB03725.1 N 0.843
EAT87520.1 Phaeosphaeria nodorum EAT87520.1 N 0.843
CHGG_08656 Chaetomium globosum CHGG_08656 N 0.831
gw1.9.853.1 Trichoderma virens gw1.9.853.1 N 0.829
BC1G_07056 Botrytis cinerea BC1G_07056 N 0.829
e_gw1.4.511.1 Trichoderma reesei e_gw1.4.511.1 N 0.829
estExt_fgenesh1_pm.C_10632 Trichoderma atroviride estExt_fgenesh1_pm.C_10632 N 0.829
SS1G_03706 Sclerotinia sclerotiorum SS1G_03706 N 0.829
MGG_07252 Magnaporthe oryzae MGG_07252 N 0.829
estExt_fgenesh1_kg.C_50066 Myceliophthora thermophila estExt_fgenesh1_kg.C_50066 N 0.817
FGSG_10271 Fusarium graminearum FGSG_10271 N 0.814
FOXG_05189 Fusarium oxysporum FOXG_05189 N 0.814
FVEG_02944 Fusarium verticillioides FVEG_02944 N 0.814
Pa_4_2600 Podospora anserina Pa_4_2600 N 0.803
estExt_Genewise1Plus.C_40474 Tremella mesenterica estExt_Genewise1Plus.C_40474 N 0.786
UM02401 Ustilago maydis UM02401 N 0.771
CNBG_5499 Cryptococcus neoformans CNBG_5499 N 0.771
estExt_fgenesh2_pm.C_40328 Serpula lacrymans estExt_fgenesh2_pm.C_40328 N 0.761
e_gw1.4.1867.1 Agaricus bisporus e_gw1.4.1867.1 N 0.757
PredSwiss_CON654.3 Pneumocystis carinii PredSwiss_CON654.3 I 0.757
RO3G_09831 Rhizopus oryzae RO3G_09831 N 0.757
gw1.7.208.1 Melampsora laricis populina gw1.7.208.1 N 0.743
SPPG_00782 Spizellomyces punctatus SPPG_00782 N 0.743
estExt_Genewise1.C_11041 Mucor circinelloides estExt_Genewise1.C_11041 N 0.743
e_gw1.4.778.1 Heterobasidion annosum e_gw1.4.778.1 N 0.732
EDP44971.1 Malassezia globosa EDP44971.1 N 0.729
gww1.2.642.1 Laccaria bicolor gww1.2.642.1 N 0.729
fgenesh1_pm.C_scaffold_6000038 Sporobolomyces roseus fgenesh1_pm.C_scaffold_6000038 N 0.714
e_gw1.29.77.1 Phycomyces blakesleeanus e_gw1.29.77.1 I 0.714
e_gw1.4.2157.1 Pleurotus ostreatus e_gw1.4.2157.1 N 0.714
PGTG_01300 Puccinia graminis PGTG_01300 N 0.714
PTTG_05043 Puccinia triticina PTTG_05043 N 0.714
estExt_fgenesh3_pg.C_140127 Postia placenta estExt_fgenesh3_pg.C_140127 N 0.704
e_gwh2.2.847.1 Phanerochaete chrysosporium e_gwh2.2.847.1 I 0.704
GP3.065690 Batrachochytrium dendrobatidis GP3.065690 N 0.700
CC1G_14585 Coprinopsis cinerea CC1G_14585 N 0.700