estExt_Genewise1.C_22136 (Myceliophthora thermophila)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_Genewise1.C_22136 T51227_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_22136 RRM 44 110
estExt_Genewise1.C_22136 RRM 135 206
estExt_Genewise1.C_22136 RRM 271 335

Links

Other RRM family RBPs
Other Myceliophthora thermophila RBPs

45 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ACLA_065300 Aspergillus clavatus CADACLAG00006222 N 0.816
AFLA_071390 Aspergillus flavus CADAFLAG00008563 N 0.816
AFUA_7G02230 Aspergillus fumigatus CADAFUAG00001190 N 0.816
An12g00410 Aspergillus niger CADANGAG00009490 N 0.816
ANIA_09090 Aspergillus nidulans CADANIAG00009524 N 0.812
AO090038000602 Aspergillus oryzae CADAORAG00009349 N 0.821
ARB_04665 Arthroderma benhamiae ARB_04665 N 0.825
BC1G_12954 Botrytis cinerea BC1G_12954 N 0.807
BDBG_04017 Blastomyces dermatitidis BDBG_04017 N 0.816
CIMG_07756 Coccidioides immitis CIMG_07756 N 0.821
CPSG_09340 Coccidioides posadasii CPSG_09340 N 0.821
EAT81253.1 Phaeosphaeria nodorum EAT81253.1 N 0.777
estExt_fgenesh1_pm.C_520029 Neurospora tetrasperma estExt_fgenesh1_pm.C_520029 N 0.951
estExt_fgenesh2_kg.C_40081 Thielavia terrestris estExt_fgenesh2_kg.C_40081 N 0.941
estExt_fgenesh2_pg.C_40625 Neurospora discreta estExt_fgenesh2_pg.C_40625 N 0.951
estExt_Genewise1.C_280098 Cochliobolus heterostrophus C5 estExt_Genewise1.C_280098 N 0.758
estExt_Genewise1.C_80620 Trichoderma atroviride estExt_Genewise1.C_80620 N 0.869
estExt_Genewise1.C_90098 Mycosphaerella fijiensis estExt_Genewise1.C_90098 N 0.764
estExt_Genewise1Plus.C_61164 Cryphonectria parasitica estExt_Genewise1Plus.C_61164 N 0.831
estExt_Genewise1Plus.C_chr_10431 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_10431 N 0.755
estExt_Genewise1Plus.C_sca_18_chr2_1_00442 Nectria haematococca estExt_Genewise1Plus.C_sca_18_chr2_1_00442 N 0.874
e_gw1.3.851.1 Trichoderma reesei e_gw1.3.851.1 N 0.879
fgenesh1_pm.00868_#_106 Aspergillus carbonarius fgenesh1_pm.00868_#_106 N 0.812
FGSG_05737 Fusarium graminearum FGSG_05737 N 0.869
FOXG_08762 Fusarium oxysporum FOXG_08762 N 0.877
FVEG_05907 Fusarium verticillioides FVEG_05907 N 0.868
GLRG_08999 Colletotrichum graminicola GLRG_08999 N 0.869
GSTUMT00001670001 Tuber melanosporum GSTUMT00001670001 N 0.816
gw1.13.164.1 Trichoderma virens gw1.13.164.1 N 0.879
HCAG_04410 Histoplasma capsulatum HCAG_04410 N 0.820
MGG_08741 Magnaporthe oryzae MGG_08741 N 0.874
MGYG_05892 Microsporum gypseum MGYG_05892 N 0.826
NCU00768 Neurospora crassa NCU00768 N 0.951
NFIA_114950 Neosartorya fischeri CADNFIAG00010593 N 0.816
PABG_01162 Paracoccidioides brasiliensis PABG_01162 N 0.812
Pa_1_5920 Podospora anserina Pa_1_5920 N 0.932
Pc21g11890 Penicillium chrysogenum Pc21g11890 N 0.817
PMAA_010670 Penicillium marneffei PMAA_010670 N 0.816
PredSwiss_ASS2010_2387.1 Pneumocystis carinii PredSwiss_ASS2010_2387.1 N 0.761
PredSwiss_CON474.2 Pneumocystis carinii PredSwiss_CON474.2 N 0.770
PTRG_04758 Pyrenophora tritici repentis PTRG_04758 N 0.754
SNOG_11545 Stagonospora nodorum SNOG_11545 N 0.777
UREG_02108 Uncinocarpus reesii UREG_02108 N 0.821
VDAG_02878 Verticillium dahliae VDAG_02878 N 0.874
VDBG_02406 Verticillium albo atrum VDBG_02406 N 0.874