CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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estExt_Genewise1Plus.C_31070
(
Cochliobolus heterostrophus C5
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
estExt_Genewise1Plus.C_31070
T51447_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_31070
RRM
4
74
LFIGGLAWHTDDQTLRSKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYAQETEADAAMQAMNNEEFDGRRIR
Links
Other
RRM
family RBPs
Other
Cochliobolus heterostrophus C5
RBPs
40 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CG4612
Drosophila melanogaster
FBgn0035016
N
0.000
GA18301-RA
Drosophila pseudoobscura
FBgn0078306
N
0.000
GD24944
Drosophila simulans
FBgn0196258
N
0.000
GE11444
Drosophila yakuba
FBgn0229249
N
0.000
GF11244
Drosophila ananassae
FBgn0088284
N
0.000
GG19920
Drosophila erecta
FBgn0112120
N
0.000
GH22019
Drosophila grimshawi
FBgn0129480
N
0.000
GI19109
Drosophila mojavensis
FBgn0141848
N
0.000
GJ22239
Drosophila virilis
FBgn0209352
N
0.000
GK19472
Drosophila willistoni
FBgn0221470
N
0.000
GL20391
Drosophila persimilis
FBgn0157986
N
0.000
GM11822
Drosophila sechellia
FBgn0166764
N
0.000