GSTUMT00010626001 (Tuber melanosporum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GSTUMT00010626001 T56963_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSTUMT00010626001 RRM 38 108

Links

Other RRM family RBPs
Other Tuber melanosporum RBPs

131 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29983.m003140 Ricinus communis 29983.m003140 N 0.000
A9PIB0_POPTR Populus trichocarpa POPTR_0007s01170 N 0.000
Ame_R004608 Ailuropoda melanoleuca Ame_R004608 N 0.718
B9MYE5_POPTR Populus trichocarpa POPTR_0017s04640 N 0.000
BRADI3G48560 Brachypodium distachyon BRADI3G48560 N 0.000
cassava43645.valid.m1 Manihot esculenta cassava43645.valid.m1 N 0.000
cassava43646.valid.m1 Manihot esculenta cassava43646.valid.m1 N 0.000
CBP20 Arabidopsis thaliana AT5G44200-TAIR-G N 0.000
chr3.CM0160.780.nd Lotus japonicus chr3.CM0160.780.nd N 0.000
Cucsa.174450 Cucumis sativus Cucsa.174450 N 0.000
EFA74823.1 Polysphondylium pallidum EFA74823.1 N 0.746
ENSCHOG00000005967 Choloepus hoffmanni ENSCHOG00000005967 N 0.704
ENSMEUG00000004730 Macropus eugenii ENSMEUG00000004730 N 0.704
ENSMEUG00000008126 Macropus eugenii ENSMEUG00000008126 N 0.718
ENSOCUG00000014372 Oryctolagus cuniculus ENSOCUG00000014372 N 0.704
ENSOPRG00000007634 Ochotona princeps ENSOPRG00000007634 N 0.704
ENSPPYG00000014449 Pongo pygmaeus ENSPPYG00000014449 N 0.718
ENSSSCG00000011835 Sus scrofa ENSSSCG00000011835 N 0.718
ENSSSCG00000011840 Sus scrofa ENSSSCG00000011840 N 0.718
ENSSTOG00000001584 Spermophilus tridecemlineatus ENSSTOG00000001584 N 0.718
e_gw1.80.70.1 Selaginella moellendorfii e_gw1.80.70.1 N 0.704
GID1.0044779 Dictyostelium purpureum GID1.0044779 N 0.746
Glyma12g33400.1 Glycine max Glyma12g33400.1 N 0.000
Glyma13g37030.1 Glycine max Glyma13g37030.1 N 0.704
GRMZM2G034804 Zea mays GRMZM2G034804 N 0.000
GSVIVG00020599001 Vitis vinifera GSVIVG00020599001 N 0.000
gw1.11.372.1 Chlorella vulgaris gw1.11.372.1 N 0.000
gw1.12.351.1 Coccomyxa C 169 gw1.12.351.1 N 0.000
LOAG_03270 Loa loa LOAG_03270 N 0.718
LOC100404338 Callithrix jacchus ENSCJAG00000013735 N 0.718
LOC_Os02g39890 Oryza sativa LOC_Os02g39890 N 0.000
MDP0000315402 Malus x domestica MDP0000315402 N 0.000
mgf009384m Mimulus guttatus mgf009384m N 0.000
mgf009822m Mimulus guttatus mgf009822m N 0.000
NCBP2 Canis familiaris ENSCAFG00000013100 N 0.718
NCBP2 Microcebus murinus ENSMICG00000003162 N 0.718
ncbp2 Dictyostelium discoideum DDB_G0287197 N 0.746
NCBP2 Loxodonta africana ENSLAFG00000006372 N 0.718
NCBP2 Homo sapiens ENSG00000114503 N 0.718
NCBP2 Equus caballus ENSECAG00000016153 N 0.718
NCBP2 Cavia porcellus ENSCPOG00000002976 N 0.704
NCBP2 Myotis lucifugus ENSMLUG00000017500 N 0.718
NCBP2 Macaca mulatta ENSMMUG00000007825 N 0.718
NCBP2 Pteropus vampyrus ENSPVAG00000017273 N 0.704
NCBP2 Pan troglodytes ENSPTRG00000015789 N 0.718
NCBP2 Procavia capensis ENSPCAG00000003219 N 0.704
NCBP2 Tupaia belangeri ENSTBEG00000015222 N 0.718
NCBP2 Tursiops truncatus ENSTTRG00000013908 N 0.718
NCBP2 Vicugna pacos ENSVPAG00000010369 N 0.704
NCBP2 Oryctolagus cuniculus ENSOCUG00000006738 N 0.718
NCBP2 Otolemur garnettii ENSOGAG00000005009 N 0.718
Ncbp2 Mus musculus ENSMUSG00000022774 N 0.718
NCBP2_BOVIN Bos taurus ENSBTAG00000008873 N 0.718
PDK_20s1327431g003 Phoenix dactylifera PDK_20s1327431g003 N 0.000
Pigz Rattus norvegicus ENSRNOG00000001746 N 0.718
PK11911.1 Cannabis sativa PK11911.1 N 0.000
ppa010346m Prunus persica ppa010346m N 0.000
SB04G025800 Sorghum bicolor Sb04g025800 N 0.000
WUBG_16568 Wuchereria bancrofti WUBG_16568 N 0.718
XM_001371285.1 Monodelphis domestica ENSMODG00000023276 N 0.718