ncbp2 (Dictyostelium discoideum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 DDB_G0287197 T34554_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
DDB0233456 RRM 34 104

Links

Other RRM family RBPs
Other Dictyostelium discoideum RBPs

111 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GID1.0044779 Dictyostelium purpureum GID1.0044779 N 1.000
EFA74823.1 Polysphondylium pallidum EFA74823.1 N 0.901
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.859
e_gw1.17.191.1 Trichoderma reesei e_gw1.17.191.1 N 0.817
fgeneshMC_pm.5_#_40 Mucor circinelloides fgeneshMC_pm.5_#_40 N 0.817
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.803
e_gw1.10.746.1 Trichoderma virens e_gw1.10.746.1 N 0.803
NCU00210 Neurospora crassa NCU00210 N 0.803
estExt_Genewise1Plus.C_50921 Neurospora discreta estExt_Genewise1Plus.C_50921 N 0.803
PTRG_00402 Pyrenophora tritici repentis PTRG_00402 N 0.789
FVEG_07036 Fusarium verticillioides FVEG_07036 N 0.789
SNOG_09598 Stagonospora nodorum SNOG_09598 N 0.789
GLRG_00177 Colletotrichum graminicola GLRG_00177 N 0.789
EAT82863.2 Phaeosphaeria nodorum EAT82863.2 N 0.789
estExt_Genewise1Plus.C_40730 Myceliophthora thermophila estExt_Genewise1Plus.C_40730 N 0.789
estExt_Genewise1.C_10147 Cochliobolus heterostrophus C5 estExt_Genewise1.C_10147 N 0.789
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 Nectria haematococca estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 N 0.789
MGG_06296 Magnaporthe oryzae MGG_06296 N 0.789
e_gw1.3.1174.1 Thielavia terrestris e_gw1.3.1174.1 N 0.789
Pa_7_2520 Podospora anserina Pa_7_2520 N 0.775
TESG_01120 Trichophyton tonsurans TESG_01120 N 0.775
estExt_Genewise1Plus.C_150343 Trichoderma atroviride estExt_Genewise1Plus.C_150343 N 0.775
NFIA_084190 Neosartorya fischeri CADNFIAG00008064 N 0.775
BC1G_04395 Botrytis cinerea BC1G_04395 N 0.775
MGYG_02166 Microsporum gypseum MGYG_02166 N 0.775
fgenesh1_pg.C_scaffold_1000747 Cryphonectria parasitica fgenesh1_pg.C_scaffold_1000747 N 0.775
PMAA_070830 Penicillium marneffei PMAA_070830 N 0.775
TEQG_01953 Trichophyton equinum TEQG_01953 N 0.775
MCYG_04468 Microsporum canis MCYG_04468 N 0.775
SS1G_13629 Sclerotinia sclerotiorum SS1G_13629 N 0.775
AFUA_2G08570 Aspergillus fumigatus CADAFUAG00004718 N 0.775
TERG_03424 Trichophyton rubrum TERG_03424 N 0.775
PABG_07236 Paracoccidioides brasiliensis PABG_07236 N 0.761
FGSG_05488 Fusarium graminearum FGSG_05488 N 0.761
VDBG_06810 Verticillium albo atrum VDBG_06810 N 0.761
HCAG_07341 Histoplasma capsulatum HCAG_07341 N 0.761
An12g03930 Aspergillus niger CADANGAG00009835 N 0.761
VDAG_05874 Verticillium dahliae VDAG_05874 N 0.761
e_gw1.18.125.1 Batrachochytrium dendrobatidis e_gw1.18.125.1 N 0.761
BDBG_08091 Blastomyces dermatitidis BDBG_08091 N 0.761
SOCG_01831 Schizosaccharomyces octosporus SOCG_01831 N 0.761
Pc13g04070 Penicillium chrysogenum Pc13g04070 N 0.761
CIMG_00837 Coccidioides immitis CIMG_00837 N 0.761
fgenesh1_pm.00772_#_82 Aspergillus carbonarius fgenesh1_pm.00772_#_82 N 0.761
CPSG_08054 Coccidioides posadasii CPSG_08054 N 0.761
AFLA_046450 Aspergillus flavus CADAFLAG00005972 N 0.746
SPOG_01217 Schizosaccharomyces cryophilus SPOG_01217 N 0.746
GSTUMT00010626001 Tuber melanosporum GSTUMT00010626001 N 0.746
SJAG_01064 Schizosaccharomyces japonicus SJAG_01064 N 0.746
PGTG_01720 Puccinia graminis PGTG_01720 N 0.746
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.732
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.732
PHUM535920 Pediculus humanus PHUM535920 N 0.732
CHGG_03355 Chaetomium globosum CHGG_03355 N 0.722
cassava43646.valid.m1 Manihot esculenta cassava43646.valid.m1 N 0.718
cassava43645.valid.m1 Manihot esculenta cassava43645.valid.m1 N 0.718
cbc2 Schizosaccharomyces pombe SPBC13A2.01c N 0.718
SB04G025800 Sorghum bicolor Sb04g025800 N 0.718
NCBP2_IXOSC Ixodes scapularis ISCW017479 N 0.718
Cucsa.174450 Cucumis sativus Cucsa.174450 N 0.718
PDK_20s1327431g003 Phoenix dactylifera PDK_20s1327431g003 N 0.718
e_gw1.40.70.1 Melampsora laricis populina e_gw1.40.70.1 N 0.718
Glyma12g33400.1 Glycine max Glyma12g33400.1 N 0.718
GRMZM2G034804 Zea mays GRMZM2G034804 N 0.718
Glyma13g37030.1 Glycine max Glyma13g37030.1 N 0.718
nasonia_NCBI_hmm134534 Nasonia vitripennis nasonia_NCBI_hmm134534 N 0.718
PK11911.1 Cannabis sativa PK11911.1 N 0.718
e_gw1.80.70.1 Selaginella moellendorfii e_gw1.80.70.1 N 0.718
NCBP2 Pteropus vampyrus ENSPVAG00000017273 N 0.718
BRADI3G48560 Brachypodium distachyon BRADI3G48560 N 0.718
FOXG_09405 Fusarium oxysporum FOXG_09405 N 0.708
PredSwiss_ASS2010_2397.2 Pneumocystis carinii PredSwiss_ASS2010_2397.2 N 0.707
PredSwiss_CON682.3 Pneumocystis carinii PredSwiss_CON682.3 N 0.707
ENSPPYG00000014449 Pongo pygmaeus ENSPPYG00000014449 N 0.704
WUBG_16568 Wuchereria bancrofti WUBG_16568 N 0.704
NCBP2 Otolemur garnettii ENSOGAG00000005009 N 0.704
NCBP2 Pan troglodytes ENSPTRG00000015789 N 0.704
Pigz Rattus norvegicus ENSRNOG00000001746 N 0.704
ENSSTOG00000001584 Spermophilus tridecemlineatus ENSSTOG00000001584 N 0.704
ENSSSCG00000011840 Sus scrofa ENSSSCG00000011840 N 0.704
ENSSSCG00000011835 Sus scrofa ENSSSCG00000011835 N 0.704
NCBP2 Oryctolagus cuniculus ENSOCUG00000006738 N 0.704
NCBP2 Macaca mulatta ENSMMUG00000007825 N 0.704
NCBP2 Loxodonta africana ENSLAFG00000006372 N 0.704
NCBP2 Homo sapiens ENSG00000114503 N 0.704
NCBP2 Equus caballus ENSECAG00000016153 N 0.704
NCBP2 Microcebus murinus ENSMICG00000003162 N 0.704
ACLA_080400 Aspergillus clavatus CADACLAG00007885 N 0.704
NCBP2 Tupaia belangeri ENSTBEG00000015222 N 0.704
CBP20 Arabidopsis thaliana AT5G44200-TAIR-G N 0.704
NCBP2 Myotis lucifugus ENSMLUG00000017500 N 0.704
Ncbp2 Mus musculus ENSMUSG00000022774 N 0.704
NCBP2 Vicugna pacos ENSVPAG00000010369 N 0.704
LOC100404338 Callithrix jacchus ENSCJAG00000013735 N 0.704
NCBP2_BOVIN Bos taurus ENSBTAG00000008873 N 0.704
LOAG_03270 Loa loa LOAG_03270 N 0.704
Ame_R004608 Ailuropoda melanoleuca Ame_R004608 N 0.704
chr3.CM0160.780.nd Lotus japonicus chr3.CM0160.780.nd N 0.704
XP_002160076.1 Hydra magnipapillata XP_002160076.1 N 0.704
ppa010346m Prunus persica ppa010346m N 0.704
MDP0000315402 Malus x domestica MDP0000315402 N 0.704
mgf009822m Mimulus guttatus mgf009822m N 0.704
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.704
LOC_Os02g39890 Oryza sativa LOC_Os02g39890 N 0.704
GSVIVG00020599001 Vitis vinifera GSVIVG00020599001 N 0.704
XM_002863560.1 Arabidopsis lyrata fgenesh2_kg.8__389__AT5G44200.2 N 0.704
Aqu1.228507 Amphimedon queenslandica Aqu1.228507 N 0.704
NCBP2 Canis familiaris ENSCAFG00000013100 N 0.704
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.704
gw1.1.1171.1 Sporobolomyces roseus gw1.1.1171.1 N 0.704
AMAG_02834 Allomyces macrogynus AMAG_02834 N 0.704