gw1.12.351.1 (Coccomyxa C 169)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 gw1.12.351.1 T56990_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.12.351.1 RRM 26 96

Links

Other RRM family RBPs
Other Coccomyxa C 169 RBPs

81 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
gw1.11.372.1 Chlorella vulgaris gw1.11.372.1 N 1.000
PDK_20s1327431g003 Phoenix dactylifera PDK_20s1327431g003 N 0.817
SB04G025800 Sorghum bicolor Sb04g025800 N 0.803
GRMZM2G034804 Zea mays GRMZM2G034804 N 0.803
Cucsa.174450 Cucumis sativus Cucsa.174450 N 0.789
GSVIVG00020599001 Vitis vinifera GSVIVG00020599001 N 0.789
BRADI3G48560 Brachypodium distachyon BRADI3G48560 N 0.789
cassava43645.valid.m1 Manihot esculenta cassava43645.valid.m1 N 0.789
cassava43646.valid.m1 Manihot esculenta cassava43646.valid.m1 N 0.789
PK11911.1 Cannabis sativa PK11911.1 N 0.775
LOC_Os02g39890 Oryza sativa LOC_Os02g39890 N 0.775
ppa010346m Prunus persica ppa010346m N 0.775
MDP0000315402 Malus x domestica MDP0000315402 N 0.775
Glyma12g33400.1 Glycine max Glyma12g33400.1 N 0.761
XM_002863560.1 Arabidopsis lyrata fgenesh2_kg.8__389__AT5G44200.2 N 0.761
chr3.CM0160.780.nd Lotus japonicus chr3.CM0160.780.nd N 0.761
CBP20 Arabidopsis thaliana AT5G44200-TAIR-G N 0.761
Glyma13g37030.1 Glycine max Glyma13g37030.1 N 0.761
A9PIB0_POPTR Populus trichocarpa POPTR_0007s01170 N 0.761
29983.m003140 Ricinus communis 29983.m003140 N 0.761
e_gw1.80.70.1 Selaginella moellendorfii e_gw1.80.70.1 N 0.746
mgf009822m Mimulus guttatus mgf009822m N 0.746
WUBG_16568 Wuchereria bancrofti WUBG_16568 N 0.732
LOAG_03270 Loa loa LOAG_03270 N 0.732
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.732
B9MYE5_POPTR Populus trichocarpa POPTR_0017s04640 N 0.732
gw1.14.317.1 Chlorella NC64A gw1.14.317.1 N 0.732
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.732
NCBP2_ANOGA Anopheles gambiae AGAP002547 N 0.732
Pigz Rattus norvegicus ENSRNOG00000001746 N 0.718
ENSSSCG00000011835 Sus scrofa ENSSSCG00000011835 N 0.718
NCBP2 Pteropus vampyrus ENSPVAG00000017273 N 0.718
NCBP2 Pan troglodytes ENSPTRG00000015789 N 0.718
ENSSSCG00000011840 Sus scrofa ENSSSCG00000011840 N 0.718
Ame_R004608 Ailuropoda melanoleuca Ame_R004608 N 0.718
ENSPPYG00000014449 Pongo pygmaeus ENSPPYG00000014449 N 0.718
estExt_Genewise1.C_sca_180152 Lottia gigantea estExt_Genewise1.C_sca_180152 N 0.718
PHUM535920 Pediculus humanus PHUM535920 N 0.718
NCBP2 Vicugna pacos ENSVPAG00000010369 N 0.718
NCBP2 Tursiops truncatus ENSTTRG00000013908 N 0.718
NCBP2 Tupaia belangeri ENSTBEG00000015222 N 0.718
ENSSTOG00000001584 Spermophilus tridecemlineatus ENSSTOG00000001584 N 0.718
NCBP2 Otolemur garnettii ENSOGAG00000005009 N 0.718
LOC100404338 Callithrix jacchus ENSCJAG00000013735 N 0.718
NCBP2 Canis familiaris ENSCAFG00000013100 N 0.718
NCBP2 Homo sapiens ENSG00000114503 N 0.718
NCBP2_CHICK Gallus gallus ENSGALG00000005753 N 0.718
NCBP2 Loxodonta africana ENSLAFG00000006372 N 0.718
NCBP2_BOVIN Bos taurus ENSBTAG00000008873 N 0.718
NCBP2_AEDAE Aedes aegypti AAEL006135 N 0.718
Bm1_02935 Brugia malayi Bm1_02935 N 0.718
XP_002160076.1 Hydra magnipapillata XP_002160076.1 N 0.718
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.718
nasonia_NCBI_hmm134534 Nasonia vitripennis nasonia_NCBI_hmm134534 N 0.718
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.718
ENSMEUG00000008126 Macropus eugenii ENSMEUG00000008126 N 0.718
NCBP2 Equus caballus ENSECAG00000016153 N 0.718
Ncbp2 Mus musculus ENSMUSG00000022774 N 0.718
NCBP2 Oryctolagus cuniculus ENSOCUG00000006738 N 0.718
NCBP2 Macaca mulatta ENSMMUG00000007825 N 0.718
XM_001371285.1 Monodelphis domestica ENSMODG00000023276 N 0.718
NCBP2 Myotis lucifugus ENSMLUG00000017500 N 0.718
ENSMGAG00000002257 Meleagris gallopavo ENSMGAG00000002257 N 0.718
NCBP2 Microcebus murinus ENSMICG00000003162 N 0.718
CpipJ_CPIJ003555 Culex pipiens CpipJ_CPIJ003555 N 0.704
ENSOCUG00000014372 Oryctolagus cuniculus ENSOCUG00000014372 N 0.704
P52299 Xenopus laevis P52299 N 0.704
ENSOPRG00000007634 Ochotona princeps ENSOPRG00000007634 N 0.704
AAH72902 Xenopus laevis AAH72902 N 0.704
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.704
BGIBMGA007585 Bombyx mori BGIBMGA007585 N 0.704
XM_001367531.1 Monodelphis domestica ENSMODG00000024607 N 0.704
ENSCHOG00000005967 Choloepus hoffmanni ENSCHOG00000005967 N 0.704
NCBP2 Cavia porcellus ENSCPOG00000002976 N 0.704
Aqu1.228507 Amphimedon queenslandica Aqu1.228507 N 0.704
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.704
estExt_Genewise1.C_5160046 Capitella teleta estExt_Genewise1.C_5160046 N 0.704
NCBP2 Procavia capensis ENSPCAG00000003219 N 0.704
NCBP2_CULQU Culex quinquefasciatus CPIJ003555 N 0.704
ENSMEUG00000004730 Macropus eugenii ENSMEUG00000004730 N 0.704
LOC100020122 Monodelphis domestica ENSMODG00000024608 N 0.704