Pa_7_9880 (Podospora anserina)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Pa_7_9880 T57954_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Pa_7_9880 RRM 214 266
Pa_7_9880 RRM 305 363
Pa_7_9880 RRM 439 504
Pa_7_9880 RRM 530 593

Links

Other RRM family RBPs
Other Podospora anserina RBPs

49 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ACLA_068670 Aspergillus clavatus CADACLAG00006690 N 0.889
AFLA_129820 Aspergillus flavus CADAFLAG00010040 N 0.877
AFUA_2G05670 Aspergillus fumigatus CADAFUAG00003365 N 0.893
An02g14100 Aspergillus niger CADANGAG00002937 N 0.881
ANIA_07480 Aspergillus nidulans CADANIAG00000573 N 0.881
AO090001000681 Aspergillus oryzae CADAORAG00000620 N 0.873
ARB_03865 Arthroderma benhamiae ARB_03865 N 0.856
ATEG_06757 Aspergillus terreus CADATEAG00009116 N 0.877
BC1G_14118 Botrytis cinerea BC1G_14118 N 0.913
BDBG_09466 Blastomyces dermatitidis BDBG_09466 N 0.889
CHGG_05709 Chaetomium globosum CHGG_05709 N 0.950
CIMG_00769 Coccidioides immitis CIMG_00769 N 0.877
CPSG_07981 Coccidioides posadasii CPSG_07981 N 0.873
EAT78895.1 Phaeosphaeria nodorum EAT78895.1 N 0.905
estExt_fgenesh1_pg.C_260060 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_260060 N 0.917
estExt_fgenesh1_pg.C_sca_10_chr8_2_00298 Nectria haematococca estExt_fgenesh1_pg.C_sca_10_chr8_2_00298 N 0.938
estExt_fgenesh1_pm.C_10719 Cryphonectria parasitica estExt_fgenesh1_pm.C_10719 N 0.930
estExt_fgenesh1_pm.C_60118 Neurospora tetrasperma estExt_fgenesh1_pm.C_60118 N 0.938
estExt_fgenesh3_kg.C_190032 Neurospora discreta estExt_fgenesh3_kg.C_190032 N 0.938
estExt_Genewise1.C_240173 Cochliobolus heterostrophus C5 estExt_Genewise1.C_240173 N 0.909
estExt_Genewise1.C_32212 Thielavia terrestris estExt_Genewise1.C_32212 N 0.963
estExt_Genewise1Plus.C_chr_30420 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_30420 N 0.872
e_gw1.10.53.1 Trichoderma virens e_gw1.10.53.1 N 0.934
e_gw1.15.72.1 Trichoderma atroviride e_gw1.15.72.1 N 0.922
e_gw1.17.287.1 Trichoderma reesei e_gw1.17.287.1 N 0.926
fgenesh1_pg.4_#_772 Myceliophthora thermophila fgenesh1_pg.4_#_772 N 0.950
fgenesh1_pm.00082_#_76 Aspergillus carbonarius fgenesh1_pm.00082_#_76 N 0.881
FGSG_05444 Fusarium graminearum FGSG_05444 N 0.934
FOXG_09455 Fusarium oxysporum FOXG_09455 N 0.934
FVEG_07083 Fusarium verticillioides FVEG_07083 N 0.934
GLRG_03643 Colletotrichum graminicola GLRG_03643 N 0.930
GSTUMT00008077001 Tuber melanosporum GSTUMT00008077001 N 0.922
MCYG_03534 Microsporum canis MCYG_03534 N 0.860
MGG_08898 Magnaporthe oryzae MGG_08898 N 0.942
MGYG_03143 Microsporum gypseum MGYG_03143 N 0.856
NCU06459 Neurospora crassa NCU06459 N 0.942
NFIA_082390 Neosartorya fischeri CADNFIAG00007689 N 0.889
PABG_04754 Paracoccidioides brasiliensis PABG_04754 N 0.881
Pc22g08880 Penicillium chrysogenum Pc22g08880 N 0.868
PMAA_071470 Penicillium marneffei PMAA_071470 N 0.889
PTRG_09392 Pyrenophora tritici repentis PTRG_09392 N 0.918
SNOG_13871 Stagonospora nodorum SNOG_13871 N 0.905
SS1G_13716 Sclerotinia sclerotiorum SS1G_13716 N 0.909
TEQG_01254 Trichophyton equinum TEQG_01254 N 0.856
TERG_04964 Trichophyton rubrum TERG_04964 N 0.857
TESG_05970 Trichophyton tonsurans TESG_05970 N 0.856
UREG_00743 Uncinocarpus reesii UREG_00743 N 0.881
VDAG_06364 Verticillium dahliae VDAG_06364 N 0.934
VDBG_08703 Verticillium albo atrum VDBG_08703 N 0.905