PTRG_00525 (Pyrenophora tritici repentis)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 PTRG_00525 T01521_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PTRT_00525 CCCH ZF 92 117
PTRT_00525 CCCH ZF 186 206

Links

Other CCCH ZF family RBPs
Other Pyrenophora tritici repentis RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1.C_31474 Agaricus bisporus estExt_Genewise1.C_31474 N 0.766
AFLA_095620 Aspergillus flavus CADAFLAG00009247 N 0.708
AO090113000083 Aspergillus oryzae CADAORAG00011692 N 0.708
estExt_fgenesh1_pg.C_120215 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_120215 N 0.723
Cd36_81440 Candida dubliniensis Cd36_81440 N 0.708
estExt_Genewise1.C_350015 Capitella teleta estExt_Genewise1.C_350015 N 0.702
GLRG_05139 Colletotrichum graminicola GLRG_05139 N 0.729
GF12572 Drosophila ananassae FBgn0089609 N 0.702
GG10627 Drosophila erecta FBgn0102935 N 0.702
GH21804 Drosophila grimshawi FBgn0129265 N 0.702
CG8635 Drosophila melanogaster FBgn0033317 N 0.702
GI20775 Drosophila mojavensis FBgn0143510 N 0.702
GL11672 Drosophila persimilis FBgn0149281 N 0.702
GA21225-RA Drosophila pseudoobscura FBgn0081213 N 0.702
GM20672 Drosophila sechellia FBgn0175554 N 0.702
GJ20510 Drosophila virilis FBgn0207650 N 0.702
GE22859 Drosophila yakuba FBgn0240063 N 0.702
FGSG_10829 Fusarium graminearum FGSG_10829 N 0.729
FOXG_12762 Fusarium oxysporum FOXG_12762 N 0.729
FVEG_11503 Fusarium verticillioides FVEG_11503 N 0.729
estExt_fgenesh2_pm.C_110045 Heterobasidion annosum estExt_fgenesh2_pm.C_110045 N 0.723
e_gwh1.21.47.1 Laccaria bicolor e_gwh1.21.47.1 N 0.745
mgf000781m Mimulus guttatus mgf000781m N 0.723
EAT85557.1 Phaeosphaeria nodorum EAT85557.1 N 0.896
XP_002493623.1 Pichia pastoris XP_002493623.1 N 0.723
e_gw1.132.32.1 Postia placenta e_gw1.132.32.1 N 0.702
RO3G_08915 Rhizopus oryzae RO3G_08915 N 0.750
Sjc_0049010 Schistosoma japonicum Sjc_0049010 N 0.723
Smp_099900 Schistosoma mansoni Smp_099900 N 0.745
estExt_fgenesh1_pm.C_120035 Schizophyllum commune estExt_fgenesh1_pm.C_120035 N 0.702
fgenesh2_kg.7_#_69_#_840_2_CFPN Serpula lacrymans fgenesh2_kg.7_#_69_#_840_2_CFPN N 0.766
SNOG_06906 Stagonospora nodorum SNOG_06906 N 0.896
XP_001191490.1 Strongylocentrotus purpuratus XP_001191490.1 N 0.745
XP_785608.2 Strongylocentrotus purpuratus XP_785608.2 N 0.745
GSTUMT00005826001 Tuber melanosporum GSTUMT00005826001 N 0.708