Q8CIQ0_RAT (Rattus norvegicus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSRNOG00000014076 T03318_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000018867 CCCH ZF 1 14
ENSRNOP00000018867 CCCH ZF 121 147
ENSRNOP00000018867 CCCH ZF 158 181
ENSRNOP00000033304 CCCH ZF 1 14
ENSRNOP00000033304 CCCH ZF 121 147
ENSRNOP00000033304 CCCH ZF 158 181
ENSRNOP00000063435 CCCH ZF 4 30

Links

Other CCCH ZF family RBPs
Other Rattus norvegicus RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL001527 Aedes aegypti AAEL001527 N 0.704
Ame_R004201 Ailuropoda melanoleuca Ame_R004201 N 1.000
BGIBMGA005962 Bombyx mori BGIBMGA005962 N 0.741
A5PJM0_BOVIN Bos taurus ENSBTAG00000004564 N 1.000
LOC100392264 Callithrix jacchus ENSCJAG00000001054 I 0.970
LOC100397507 Callithrix jacchus ENSCJAG00000004080 I 0.866
MBNL2 Canis familiaris ENSCAFG00000005523 I 0.881
MBNL3 Cavia porcellus ENSCPOG00000008092 N 0.892
MBNL2 Dasypus novemcinctus ENSDNOG00000018141 N 0.711
GI18620 Drosophila mojavensis FBgn0141359 N 0.704
GD11258 Drosophila simulans FBgn0183008 N 0.704
MBNL3 Echinops telfairi ENSETEG00000015907 N 0.711
MBNL1 Echinops telfairi ENSETEG00000016568 N 0.711
MBNL2 Felis catus ENSFCAG00000005148 N 0.908
MBNL1 Felis catus ENSFCAG00000002293 N 1.000
MBNL1 Gorilla gorilla ENSGGOG00000009430 I 0.985
MBNL3 Homo sapiens ENSG00000076770 I 0.866
MBNL1 Homo sapiens ENSG00000152601 D 0.985
MBNL2 Macaca mulatta ENSMMUG00000022744 N 0.711
MBNL3 Macaca mulatta ENSMMUG00000003071 I 0.866
MBNL1 Meleagris gallopavo ENSMGAG00000010862 N 1.000
MBNL3 Monodelphis domestica ENSMODG00000015304 I 0.894
MBNL3 Ornithorhynchus anatinus ENSOANG00000011697 I 0.908
MBNL2 Oryctolagus cuniculus ENSOCUG00000000220 I 0.881
MBNL1 Otolemur garnettii ENSOGAG00000009336 N 0.711
MBNL2 Otolemur garnettii ENSOGAG00000017001 N 0.738
MBNL3 Procavia capensis ENSPCAG00000014188 N 0.862
MBNL1 Procavia capensis ENSPCAG00000002143 N 1.000
MBNL3 Sus scrofa ENSSSCG00000012676 N 0.892
MBNL1 Sus scrofa ENSSSCG00000011720 N 1.000
MBNL3 Tarsius syrichta ENSTSYG00000014189 N 0.791
MBNL1 Tetraodon nigroviridis ENSTNIG00000007695 N 0.955
MBNL3 Tupaia belangeri ENSTBEG00000008063 N 0.877
mbnl3 Xenopus tropicalis ENSXETG00000005409 I 0.819